Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi13g0521 ATGGATCCCTCTGAATCCGACTCAACAGCTGTTTCGAGCTCAATCAAAGACTCAAAACTGGGCAATAACTCATCTTCTTCCCTACCCACTTCCCATCATGATCCTAAAACTTCAGATCTCAATCCCAGGGATGAGACTGATGCCCCACATGAGGATTTTCAGAACAAGCTGGATTTGAAGGATAAGGATGAAGGGGAAGTAGAGGGAAAGGAGAAGAAAGATTCTGAATTTGATGATGGGAAAAAAGAAGTAGGTGGTGTTGTAGCTGATTCCGAAGAATCTGTAAAGGAACAGGCTTTTGATGAAGTCACCCAGAATTGGGATGGAAATGGAGAAGATGGTTGGGGGGATATTGTGAAGGAGAGTGTGACTGATAATTTTGGTGTTGGTAATGAAGTCGCCCAGAATTGGGATGGAAATGGGGAAGATGGTTGGGGGGAGATTGTGAAGGAGAGTGAGACTGATAATTTTGGTGTTGGTAATGAAGTCACCCAGAATTGGGATGGAAATGGGGAAGATGGTTGGGGGGAGATTGTGAAGGAGAGTGGGAATGATAATTTTGGTGTAGATAATGAAACTATCGGTGATGAAGTGGAGAAGAACAATGAGGAAAGCAGTGGTAAAGCACATCAATACCCTTTGAGGCCTGAAGCTGAAGATTGTGCGTTCTATCTCAAGACTGGAACTTGCAAGTTTGGGTTTAACTGCAAGTTTAATCACCCTCTTAGGAGGAAAGGCCAGGTCGTTAGGGAGAAGGGAAGAGAAAGAGAAGAATCAGGAGAAAGATCAGGGCAGACTGAATGCAAGTATTATCTAAAGTCAGGAGGTTGTAAATACGGAAAGTCTTGTAAATTTAACCACACCAGAGGAAAATGTTCTGCAACTGTAACTGCTACTGCAACCACTATTTTGGAACTTAACTTTCTCGGCCTGCCTATTCGTCTGGGAGAAAAAGAATGCCCATATTATATGCGTACTGGCTCTTGCAAGTTTGGCGCAAACTGCAGATTCAACCATCCTGATCCTACCATTGTTGGAGGAAGTGATCCTTCTTCAACATTTGCTAATGGCGGGGCTGTTCCTTTGCAAGGCATCTCACAGCCGTCTATACCCTCTTGGTCTTCTCCAAGAGCATTAAATGAAGCTGGTCCTTTTGTGCCAATGATGATTCCACCTGTTCAAGGGGTTTCTCCCCAAAGTTCTGATTGGAATGGATATCAGGCACCTGTCTACCTACCTGAGAGGACCGTGCACCCAGCATCTACGTATGTTGTGAACAACCCAGCTATTGAAACAAATGTCTATATGCATCATCCAAAGCAGATGCAGGTTGATGAGTTTCCTGAAAGGCCTGGTGAACCAGAGTGCAGTTACTACTTAAAAACTGGCCATTGCAAATTTAGATCTAATTGTAAATTTCATCATCCAAAGAACCGTACTCCAAGACCACTATGCACCCTAAGCGACAAGGGTCTGCCTTTGAGACCTGATCAGGGTGTCTGCTCTCACTATAGTCGTTATGGAATATGCAAATTCGGGCCATCATGTAAGTTTGACCACCCAACAGATCTAATGCCGTCAAATATGACTGGACCTGATCAGGAATCCTCCTACACCAACTCTGGTAGTGTAGAAGTGGCTGAGATGGCTGCAAGTGCAGGTGCAGGTGCAGGTGCAGGTGACTCCCCAGTCCCCAATTAA 1701 0.4468 MDPSESDSTAVSSSIKDSKLGNNSSSSLPTSHHDPKTSDLNPRDETDAPHEDFQNKLDLKDKDEGEVEGKEKKDSEFDDGKKEVGGVVADSEESVKEQAFDEVTQNWDGNGEDGWGDIVKESVTDNFGVGNEVAQNWDGNGEDGWGEIVKESETDNFGVGNEVTQNWDGNGEDGWGEIVKESGNDNFGVDNETIGDEVEKNNEESSGKAHQYPLRPEAEDCAFYLKTGTCKFGFNCKFNHPLRRKGQVVREKGREREESGERSGQTECKYYLKSGGCKYGKSCKFNHTRGKCSATVTATATTILELNFLGLPIRLGEKECPYYMRTGSCKFGANCRFNHPDPTIVGGSDPSSTFANGGAVPLQGISQPSIPSWSSPRALNEAGPFVPMMIPPVQGVSPQSSDWNGYQAPVYLPERTVHPASTYVVNNPAIETNVYMHHPKQMQVDEFPERPGEPECSYYLKTGHCKFRSNCKFHHPKNRTPRPLCTLSDKGLPLRPDQGVCSHYSRYGICKFGPSCKFDHPTDLMPSNMTGPDQESSYTNSGSVEVAEMAASAGAGAGAGDSPVPN 566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi13g0521 566 Gene3D - 180 251 - -
Mibi13g0521 566 ProSiteProfiles Zinc finger C3H1-type profile. 450 478 IPR000571 GO:0046872
Mibi13g0521 566 MobiDBLite consensus disorder prediction 1 35 - -
Mibi13g0521 566 MobiDBLite consensus disorder prediction 527 546 - -
Mibi13g0521 566 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 452 477 IPR000571 GO:0046872
Mibi13g0521 566 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 500 521 IPR000571 GO:0046872
Mibi13g0521 566 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 219 241 IPR000571 GO:0046872
Mibi13g0521 566 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 317 340 IPR000571 GO:0046872
Mibi13g0521 566 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 265 287 IPR000571 GO:0046872
Mibi13g0521 566 MobiDBLite consensus disorder prediction 1 96 - -
Mibi13g0521 566 MobiDBLite consensus disorder prediction 36 96 - -
Mibi13g0521 566 ProSiteProfiles Zinc finger C3H1-type profile. 314 342 IPR000571 GO:0046872
Mibi13g0521 566 Gene3D - 252 344 - -
Mibi13g0521 566 ProSiteProfiles Zinc finger C3H1-type profile. 262 290 IPR000571 GO:0046872
Mibi13g0521 566 SUPERFAMILY CCCH zinc finger 315 342 IPR036855 GO:0046872
Mibi13g0521 566 ProSiteProfiles Zinc finger C3H1-type profile. 495 523 IPR000571 GO:0046872
Mibi13g0521 566 SUPERFAMILY CCCH zinc finger 455 478 IPR036855 GO:0046872
Mibi13g0521 566 PANTHER PROTEIN PHOSPHATASE RELATED 24 535 - -
Mibi13g0521 566 MobiDBLite consensus disorder prediction 526 566 - -
Mibi13g0521 566 SUPERFAMILY CCCH zinc finger 266 291 IPR036855 GO:0046872
Mibi13g0521 566 SMART c3hfinal6 262 289 IPR000571 GO:0046872
Mibi13g0521 566 SMART c3hfinal6 215 242 IPR000571 GO:0046872
Mibi13g0521 566 SMART c3hfinal6 497 522 IPR000571 GO:0046872
Mibi13g0521 566 SMART c3hfinal6 314 341 IPR000571 GO:0046872
Mibi13g0521 566 SMART c3hfinal6 450 477 IPR000571 GO:0046872
Mibi13g0521 566 Gene3D - 434 488 - -
Mibi13g0521 566 Gene3D - 495 547 - -
Mibi13g0521 566 SUPERFAMILY CCCH zinc finger 214 243 IPR036855 GO:0046872
Mibi13g0521 566 SUPERFAMILY CCCH zinc finger 493 521 IPR036855 GO:0046872
Mibi13g0521 566 ProSiteProfiles Zinc finger C3H1-type profile. 215 243 IPR000571 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi13g0521 Mibi-ChrMibi13 7094640 7098184 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi13g0521 212 558 C2H2 Transcription Factor Family AT3G02830 39.674 2.30e-78 250
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Mibi13g0521 zf-CCCH 4.1e-08 CL0537