Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi13g0518 ATGTTGGAATACTACCAGCTTCTTGATGCAAGGTCCTCCTTTGAAGATTCTCTTAAGGCACTTGAGGCTGACATTCAACATGCCAATATGCTGGCTGCTTCTATTCCTAGGGGCAAGGGCAGGGCTTGTCTCCAAATGAAGTTAGTTTGCAGTCAGTTGGCACCAATCCTCTTATATTTACTTCGATGGATAGATTGCTCCTCTTCTTGTCTACTTTCAAGCTATTTGAATCTATTCCACATAATTGTGTATAAGGTGCATTCAAATGGGAAGCCAAAAATCTCTTCGTATGGAAGGAAAGCAAGCATAAGGGAATTCTATGGTGTTATATTGCCTTCACTTCAGCGCCTTCATGGTGATTTAATAGATGCTGATATAACTCAAGACAAAGGTCAAAATTTACAGATGGTAGATAATAGGAGTATTGAAGATAAGAGGAATATTTGTGATGTGGACATGGAAAGAGAAAACGAGTGTGGCATCTGCTTAGAGCCTTGTACCAAAGTGGTTTTGCCAAATTGCTGCCATGCCATGTGTATAAATTGCTACCACGACTGGAACACAAGATCGGAATCTTGTCCATTTTGTCGAGGAAGCTTGAAGAGAGTTAACTCAGGTGATTTGTGGGTTCTAACGTGCACCAAGGACATTATTGATGTGCAAACTGTTATTAGAGAAGATATGCTTCGTCTTTCTCTCTTCATAAACAACCTGCCTAAGGATATGCCTGATGCTCTCTTCTTAATGTATAATGAGTACTTATTTTAA 768 0.3971 MLEYYQLLDARSSFEDSLKALEADIQHANMLAASIPRGKGRACLQMKLVCSQLAPILLYLLRWIDCSSSCLLSSYLNLFHIIVYKVHSNGKPKISSYGRKASIREFYGVILPSLQRLHGDLIDADITQDKGQNLQMVDNRSIEDKRNICDVDMERENECGICLEPCTKVVLPNCCHAMCINCYHDWNTRSESCPFCRGSLKRVNSGDLWVLTCTKDIIDVQTVIREDMLRLSLFINNLPKDMPDALFLMYNEYLF 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi13g0518 255 SUPERFAMILY RING/U-box 148 202 - -
Mibi13g0518 255 Pfam Ring finger domain 157 197 IPR001841 -
Mibi13g0518 255 FunFam RING/U-box superfamily protein 140 206 - -
Mibi13g0518 255 ProSitePatterns Zinc finger RING-type signature. 174 183 IPR017907 -
Mibi13g0518 255 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 125 206 IPR013083 -
Mibi13g0518 255 PANTHER RING FINGER PROTEIN 41, 151 12 253 - -
Mibi13g0518 255 ProSiteProfiles Zinc finger RING-type profile. 159 197 IPR001841 -
Mibi13g0518 255 SMART ring_2 159 196 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi13g0518 Mibi-ChrMibi13 7074099 7075836 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi13g0518 158 235 C3H Transcription Factor Family AT2G20030 35.294 7.12e-06 44.7