Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi13g0489 ATGGCGAACCAATCCAAAGCTAAGCCTAACGTCGACCCTAACTCTGGCTTCTGCCCTTCAACAAGAACATTCCATAGCCTCCGTCCTCACTTCCCTGATCCTCCTCTCTCCATCACTGACTTCACATTCTCTCTCCTCCCCTCCGCCGCCTCCTCCGCCACCGTCCTCGTCGACTCCGTCACCGGAAACCGCCTTTCCTACTCCCTCTTCGTGAAGCAAGTCAGAAACTTGGCTTCGTCCCTCTCTTCCCTCCTCACACCTCTCTCCAAAGGACACGTGGCATTCATCCTCTCCCCTTCTTCCCTTCACATCCCAGTTCTGTATTTCTCTCTGTTATCTCTGGGAATAGTGGTCTCACCAGCTAACCCACTCAGCTCTGACTCCGAGTTGGCTCACCAGCTCCGACTCATTCAACCTGTCATCGCATTCGCCACCTCCTCTACTTCCCACAAGATCCCAAACCTTCCATACGGCACCGTTTTACTGGACTCCCATGAGTTCGAGTCCATGATAAATGAAGAAAACAGGGGAAGTGATGAAAACAGAGTTGTGGTGACTCAATCCGACACGGCCGCCATTCTCTTCTCTTCCGGAACCACTGGCTTAGTAAAAGGAGTTCTATCGACTCATGGGAATTTCATTTCAATCATCAATGGCCTTTACCAATCGAGGAAGATGAATGATGAAGAACGCAGAGTGTGCTTGTTCCCCTTGCCTCTATTTCACGTGTTTGGATTTCTCATGCTGCTTTCTTCCGTGGTATTTGGAGACACCATTGTTTTGATGCAGAGGTTTGATTTCCAAGAGATGCTGAAGGTTGTAGAGGGATACAGAATCACTAGCATGCCGGTGTCGCCGCCGCTTGTGGTGGCGTTGACCAAGTCGGAGTTGGTCAACAAGTACGACCCCAGCTCGCTTCGATTTCTGAATTGCGGCGGAGCTCCGCTCGGCAAGGAGGTGGCGGAGAATTTCAAACTTAAATTTCCTAACGTGGAAATTGCCGTGGGCTATGGTCTGACTGAGAGCTCAGGTTTGGCAACGAGAATGATAGGGCCTGATGAGACTAAGCGTCACGGTTCAGTGGGGAAACTGCACAATAAATTTGAGGCCAAAATAGTGGATACTGTGTCTGGAGAAGCATTGCCTCCTGGTAAGAAAGGAGAATTATGGTTGCGAAGTCCCACAATTATGAAAGGATATGTGGGAGATGAAAAGGCCACAGCTCAGACATTGGATCCAGAAGGATGGCTAAAGACTGGAGATCTTTGTTACTTTGACTCTGAAGGATTCCTCTATATTGTCGATAGGTTAAAGGAGCTCATTAAATACAAAGCTTACCAGGTAGCCCCTGCTGAGTTGGAACTTCTACTTCTCTCCAATCCTGAAATTGCTGATGCTGCCGTAGTTCCGTACCCAGATGAAGATGCAGGGCAGATACCAATGGCCTTTGTAGTCAGAAAATCAGGAAGAAATATTAGTGACTCTGAGGTTATGGATTTTGTGGCAAAGCAGGTGGCACCATACAAGAAAATAAGGCGGATGTCATTTGTGAGCAGTATTCCAAAATCTCCATCAGGCAAAATATTGAGAAGGGAATTAGTTACTTATGCCCTCTCCGCTTTTTCCTCCAAACTGTGA 1638 0.4811 MANQSKAKPNVDPNSGFCPSTRTFHSLRPHFPDPPLSITDFTFSLLPSAASSATVLVDSVTGNRLSYSLFVKQVRNLASSLSSLLTPLSKGHVAFILSPSSLHIPVLYFSLLSLGIVVSPANPLSSDSELAHQLRLIQPVIAFATSSTSHKIPNLPYGTVLLDSHEFESMINEENRGSDENRVVVTQSDTAAILFSSGTTGLVKGVLSTHGNFISIINGLYQSRKMNDEERRVCLFPLPLFHVFGFLMLLSSVVFGDTIVLMQRFDFQEMLKVVEGYRITSMPVSPPLVVALTKSELVNKYDPSSLRFLNCGGAPLGKEVAENFKLKFPNVEIAVGYGLTESSGLATRMIGPDETKRHGSVGKLHNKFEAKIVDTVSGEALPPGKKGELWLRSPTIMKGYVGDEKATAQTLDPEGWLKTGDLCYFDSEGFLYIVDRLKELIKYKAYQVAPAELELLLLSNPEIADAAVVPYPDEDAGQIPMAFVVRKSGRNISDSEVMDFVAKQVAPYKKIRRMSFVSSIPKSPSGKILRRELVTYALSAFSSKL 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi13g0489 545 FunFam 4-coumarate--CoA ligase 2 439 540 - -
Mibi13g0489 545 Gene3D - 29 438 IPR042099 -
Mibi13g0489 545 CDD 4CL 32 533 - -
Mibi13g0489 545 Gene3D - 439 539 IPR045851 -
Mibi13g0489 545 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 17 534 - -
Mibi13g0489 545 SUPERFAMILY Acetyl-CoA synthetase-like 52 539 - -
Mibi13g0489 545 ProSitePatterns Putative AMP-binding domain signature. 193 204 IPR020845 -
Mibi13g0489 545 Pfam AMP-binding enzyme 52 443 IPR000873 -
Mibi13g0489 545 Pfam AMP-binding enzyme C-terminal domain 452 527 IPR025110 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi13g0489 Mibi-ChrMibi13 6815153 6818518 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi13g0489 11 545 Monolignol Biosynthesis Gene Families AT5G63380 58.228 0.0 632