Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi13g0476 ATGGCGTCTTTTCAATCCTCACTACAATCCAATCACATCCATCCCACTCAATTCCCCAGAAGCTTCCTCTCCCAAAAACCCCTCCTCAGCCTCTCTTTCTCCGCCACCAATTTCCCTTCTCTCCAACTCAAATTCCCCGGCGCCGGCCCCGGCAACAGCCGCCGTTCCGGCGGCGCCCTCGGCACCAAGATGGCGGCGACGGCGGCCGCAAGCTACGCCCTAGCCCTCGCCGACGTGGCCAACGCCAACAACACCCTAGATTCCACCACCTCCGACATCGAGAAAATCGAACAAGTCTTCTCCGATCCTCAGGTTTTCCAATTTTTCTCCAATCCAACCATCGATCTCGAGAATAAGCGCAAGGTTGTTGATGAAATTGCGACTTCCTCAAGCTTACAGCCTCACACTCGTAATTTCCTCTACATTCTGTTGGACGCCAAGAGGATAGATCTGATCAACGAAATAGCGAAGGAGTATGAATTTGTGTACAATGAGTTGACCAACACGGAGCTCGCTGTGGTGAGCTCTGTGGTGAAATTGGAATCGGAGCAATTGTCGCAGATCGCGAAGCAGGTTCAGAAATTGACAGGCGCGAAGAATGTGAGGGTTAAGACTTTGATTGATCCGAGTTTGGTTGCTGGATTTACCGTTAGGTATGGGAATTCTGGATCCAAGTTGATTGATATGAGTGTGAAGAAGCAGCTTGAGGATATTGCTGCTCAGCTTGATTTGGGTGACATCACACTCACTGTATAA 756 0.504 MASFQSSLQSNHIHPTQFPRSFLSQKPLLSLSFSATNFPSLQLKFPGAGPGNSRRSGGALGTKMAATAAASYALALADVANANNTLDSTTSDIEKIEQVFSDPQVFQFFSNPTIDLENKRKVVDEIATSSSLQPHTRNFLYILLDAKRIDLINEIAKEYEFVYNELTNTELAVVSSVVKLESEQLSQIAKQVQKLTGAKNVRVKTLIDPSLVAGFTVRYGNSGSKLIDMSVKKQLEDIAAQLDLGDITLTV 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi13g0476 251 ProSitePatterns ATP synthase delta (OSCP) subunit signature. 201 220 IPR020781 GO:0015986|GO:0016020|GO:0046933
Mibi13g0476 251 Pfam ATP synthase delta (OSCP) subunit 69 242 IPR000711 GO:0015986|GO:0046933
Mibi13g0476 251 PRINTS ATP synthase delta subunit signature 148 162 IPR000711 GO:0015986|GO:0046933
Mibi13g0476 251 PRINTS ATP synthase delta subunit signature 68 87 IPR000711 GO:0015986|GO:0046933
Mibi13g0476 251 PRINTS ATP synthase delta subunit signature 137 148 IPR000711 GO:0015986|GO:0046933
Mibi13g0476 251 PRINTS ATP synthase delta subunit signature 199 214 IPR000711 GO:0015986|GO:0046933
Mibi13g0476 251 PRINTS ATP synthase delta subunit signature 217 235 IPR000711 GO:0015986|GO:0046933
Mibi13g0476 251 SUPERFAMILY N-terminal domain of the delta subunit of the F1F0-ATP synthase 65 168 IPR026015 -
Mibi13g0476 251 TIGRFAM ATP_synt_delta: ATP synthase F1, delta subunit 69 242 IPR000711 GO:0015986|GO:0046933
Mibi13g0476 251 Gene3D - 68 160 IPR026015 -
Mibi13g0476 251 Hamap ATP synthase subunit delta [atpD]. 64 244 IPR000711 GO:0015986|GO:0046933
Mibi13g0476 251 Coils Coil 79 99 - -
Mibi13g0476 251 PANTHER ATP SYNTHASE DELTA CHAIN 59 243 IPR000711 GO:0015986|GO:0046933
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi13g0476 Mibi-ChrMibi13 6726229 6726984 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi13g0476 57 249 Primary Pumps ATPases AT4G09650 70.984 2.14e-98 285