Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi13g0467 ATGGAATGCAATCAAGAGGATGCCGTGAAGGCTAAAGAGCTTGCTGAGAAAAAGATTTTAGAGAAGGATCTTGCTGGCGCAAAAATGTTAGCCCTGAAGGCTCAAGACTTGTGTCCTAATCTTGGTGGTCTTCCTCAACTGCTAGCAACAATTGAGGTTTATGCATCTTCTGAAAGAAAAATACATGGGGAAGTTGATTGGTATGGTGTTCTTGGAGTGGATCCAACGGCTGATGATGAAACTATTCGAACCCGTTATAGGAAACTGGCACTAACACTACACCCTGATAAAAACAAATCAACAGGTGCAAATGGGGCTTTTAGCCTAATCTCTCAAGCATGGAGTTTGCTATCCGACAAAGCAAAGAAAATCTTTTATGACAAAAAACGCAATTCAGGGGTTGTGAAGCAAACATTTCGGATCATGTGCAATTTTTGCAGGACACAGTTTGAGTACTCTTTAGCTGATCTTAACCGCAAGCTTGCATGCATAATATGCCATAGGAAATTTGTAACATTTGAGGTACCGACCCAATCTTCACACATGAATACTTCTTCCACCCCAAAAGGAAGAATGAAGAAAACTCCTGCTGAGGATAAGAATTTGAAAAGAGGGCATGAAGATAAAGCACCTCCTGTAATGATGGAGGAGGACCATTCTGGGAAAACTCAAGCAGTTAAGACAACCAATGCTGGTTCAGCTTTTCAATCTTCTTGTTTTGGCTCCAATTCTGCTCCAAAAAGAAACAGGCCAAGCAAAAAAAGGCATGTGGACAAATGCAGAAACGATAGTGATAGAAAAGATATGGAAGCGGTGATGACATGTCACAATGAAGGAATGAGCATGGGTGATGAGCGTGGATCTCATAAGGGTAGTTATGAGACACAGAAAGTGAATGCTGCTGGAGACTGCAAACATAATGGGATGACGGATATGTCTCAACTGCAAATAAGAAACATGTTGATGGACATGGCTAGGAAGGATATCCGAAGGAAGCTTAATGAGTCTAGTGTTGCTCCTGTATTAAGGAATTTAGACAAGTCAAGAAATACCAACAAGCAAGCAAAAGAGAAGGGCAAAGAGAGGAGTGGGAATGCTGTGAAATCTGGTGCACAAGAATGTCAAGAACAAGAACTTGTTGATTCAGAGACCCGGGCCAAAAAGTCCTCCTCTTCTGATAATCTTGTTTCTCAAGTAACTGATTTTGTGTCTATGAATGTTCCAGACCCAGATTTTCATGATTTTGACAATGACCGCACCGAAAAGGCCTTTGGTGGGAATCAGGTGTGGGCTGTTTATGATGATGATGACGGCATGCCTCGTTACTATGCTTTGATCCACAATGTAATATCTTTAAAGCCCTTCAAAATGAAGATCAGTTTGCTTAACTCCAAAAGCAATGATGAACTGGCCCCAATAAAGTGGATCGGTTCTGGCTTTCACAAGACCAGTGGTGATTTCCGGAAAGGCAAGCATGTTATTAATGAATCTGTTAATTCCTTCTCTCATAGAGTGAATTGGAAGAAAGGCTTGAGAGGAGTTATACATATATACCCAAAGAAGGGTGATGTTTGGGCTCTATATAGGAACTGGACTCCTGATTGGAATGAACTGACTCCTGATGAAATCATACATAAATATGACATGGTTGAAGTGCTTGATGACTACAATGATGAACGAGGTGTGGATGTTGCCCCACTTGTTAAAGTTTCAGGTTTCAAGACAGTATTCCGGAGGCATGATGATCCTAGAAATATCAGAAACATTCCCAGGGCTGAGATGTTTTGTCTGTCACACCAGGTGCCTTCATACTTGCTTACTGGTCAAGAAGGTGTTAATGCTCCTAGAGGTTGCTTGGAGCTTGATCCTGCTGCTTTACCTATGGAACTTCTTCAGGTGGTAACAGAAGCACCGGAGACAGCAAAAGAAATGAATACTGGAAAATCTTCAGAGATGGGGCCTAAACATAATGCTACAGAAAATGAGAAGGTCAAGACGTTTCAGGTGACCCAGGAAAAAGATTCTGTAGGGGAAGCAATAGCTGAAGAAATTAAAAGGAAGGGAGATATGGCAGAGAATTTGATTGTGTATAAGAGGAGACGTACAAGGGAAAACAAAGGCATAAAGTGGCAAGTGGATTTTCTCGCACCCTTCGATCAAACCCTCGAAGCAAAACACATCCATTTGGCCAATTCTCAGAGAGAATCCATGGACAACAACAATCAACAAGCTCAATCCTCACCATACCCACCTCAAAACCCTCCTCACCCTCCCCCTCCTTTTCACCATCTTCTTCAGCAACAACAACAACAGCTTCAAATGTTCTGGTCCTATCAGCGTCAAGAAATCGAGCATGTGAATGATTTCAAGAATCATCAGCTTCCCCTCGCTAGAATCAAGAAGATAATGAAGGCTGATGAAGATGTCCGAATGATTTCAGCGGAAGCCCCCATTTTGTTTGCTAAGGCATGTGAGCTTTTCATCCTTGAGCTCACAATTCGATCTTGGCTTCACGCAGAGGAGAACAAGAGGAGGACCCTTCAGAAGAATGATATAGCTGCTGCTATTACTAGGACTGATATCTTTGATTTCTTGGTTGATATTGTGCCTAGAGATGAGATCAAGGATGAGGCTGGCCTTGGTGGCATTGTTGGTACCACTGCTAGTGGTGTTCCTTACTATTATCCTCCCATGGGCCAACCAGCTGGTCCACCTGGTGGCATGATTATTGGCCGGCCCGCCGTCGATCCCACCGGAGTTTATGTCCAACCGCCGTCGCAGGCTTGGCAGTCTGTATGGCAGACAGCTGCTGAGGATGGATCATATGGTAGTGGTGGTAATGGTGGACAGGGAAACCTTGATGGACAGAGTTGA 2874 0.4318 MECNQEDAVKAKELAEKKILEKDLAGAKMLALKAQDLCPNLGGLPQLLATIEVYASSERKIHGEVDWYGVLGVDPTADDETIRTRYRKLALTLHPDKNKSTGANGAFSLISQAWSLLSDKAKKIFYDKKRNSGVVKQTFRIMCNFCRTQFEYSLADLNRKLACIICHRKFVTFEVPTQSSHMNTSSTPKGRMKKTPAEDKNLKRGHEDKAPPVMMEEDHSGKTQAVKTTNAGSAFQSSCFGSNSAPKRNRPSKKRHVDKCRNDSDRKDMEAVMTCHNEGMSMGDERGSHKGSYETQKVNAAGDCKHNGMTDMSQLQIRNMLMDMARKDIRRKLNESSVAPVLRNLDKSRNTNKQAKEKGKERSGNAVKSGAQECQEQELVDSETRAKKSSSSDNLVSQVTDFVSMNVPDPDFHDFDNDRTEKAFGGNQVWAVYDDDDGMPRYYALIHNVISLKPFKMKISLLNSKSNDELAPIKWIGSGFHKTSGDFRKGKHVINESVNSFSHRVNWKKGLRGVIHIYPKKGDVWALYRNWTPDWNELTPDEIIHKYDMVEVLDDYNDERGVDVAPLVKVSGFKTVFRRHDDPRNIRNIPRAEMFCLSHQVPSYLLTGQEGVNAPRGCLELDPAALPMELLQVVTEAPETAKEMNTGKSSEMGPKHNATENEKVKTFQVTQEKDSVGEAIAEEIKRKGDMAENLIVYKRRRTRENKGIKWQVDFLAPFDQTLEAKHIHLANSQRESMDNNNQQAQSSPYPPQNPPHPPPPFHHLLQQQQQQLQMFWSYQRQEIEHVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDEIKDEAGLGGIVGTTASGVPYYYPPMGQPAGPPGGMIIGRPAVDPTGVYVQPPSQAWQSVWQTAAEDGSYGSGGNGGQGNLDGQS 957
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi13g0467 957 FunFam Nuclear transcription factor Y subunit gamma 762 871 - -
Mibi13g0467 957 Gene3D DnaJ domain 53 144 IPR036869 -
Mibi13g0467 957 MobiDBLite consensus disorder prediction 733 762 - -
Mibi13g0467 957 MobiDBLite consensus disorder prediction 748 762 - -
Mibi13g0467 957 MobiDBLite consensus disorder prediction 236 262 - -
Mibi13g0467 957 SUPERFAMILY Histone-fold 751 865 IPR009072 GO:0046982
Mibi13g0467 957 MobiDBLite consensus disorder prediction 192 218 - -
Mibi13g0467 957 MobiDBLite consensus disorder prediction 178 218 - -
Mibi13g0467 957 SMART dnaj_3 65 122 IPR001623 -
Mibi13g0467 957 MobiDBLite consensus disorder prediction 733 747 - -
Mibi13g0467 957 MobiDBLite consensus disorder prediction 349 364 - -
Mibi13g0467 957 Pfam Domain of unknown function (DUF3444) 404 610 IPR024593 -
Mibi13g0467 957 CDD DnaJ 66 119 IPR001623 -
Mibi13g0467 957 MobiDBLite consensus disorder prediction 934 957 - -
Mibi13g0467 957 PANTHER BNAC03G44070D PROTEIN 1 627 - -
Mibi13g0467 957 ProSitePatterns Nt-dnaJ domain signature. 107 126 IPR018253 -
Mibi13g0467 957 MobiDBLite consensus disorder prediction 340 393 - -
Mibi13g0467 957 Pfam DnaJ domain 66 127 IPR001623 -
Mibi13g0467 957 PRINTS DnaJ domain signature 86 101 IPR001623 -
Mibi13g0467 957 PRINTS DnaJ domain signature 68 86 IPR001623 -
Mibi13g0467 957 PRINTS DnaJ domain signature 102 122 IPR001623 -
Mibi13g0467 957 Gene3D Histone, subunit A 761 871 IPR009072 GO:0046982
Mibi13g0467 957 SUPERFAMILY Chaperone J-domain 60 131 IPR036869 -
Mibi13g0467 957 Pfam Core histone H2A/H2B/H3/H4 758 856 IPR007125 GO:0003677
Mibi13g0467 957 ProSiteProfiles dnaJ domain profile. 66 130 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi13g0467 Mibi-ChrMibi13 6641842 6649148 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi13g0467 761 957 CCAAT-HAP5 Transcription Factor Family AT3G48590 87.685 3.68e-102 317
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Mibi13g0467 DUF3444 2.2e-72 No_clan