Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi13g0456 ATGGATTGGAATATGAAAGGTGGGTCATGGGATTTGAGTGAAATGGATGAAAGAGGTATACCCAACATAGAAACAATAAGTGTAGATAACTATAACAACAGTTCAAGCAGATTTGGAATAGTGAAGGGAAGCAGCAGTATTATTAGTGGTGGAGGCGAGTTTTGTGTTGATTTGAAGCTGGGTCGTCATGTCTCCAATTCTGTGACCGTACCAACAGGGACTAAGTTGAAAACTTCGGATGGCGGAGGGTCAAAAACGGGAGGGTCAACAGGGAAGAGAGGAAGACGAATGAACAGTGGGAACCAAACGGCGTCGTGTTTGGTGGATGGGTGCAGTTCAGATATGAGGAATTGCAGAGAGTACCATAGGCGTCACAAAGTGTGTGAGCTTCATTCCAAAACTCCTGTTGTCACCATTGGAGGCCTCAACCAAAGGTTCTGCCAACAGTGTAGCAGGTTCCATTCACTGGAAGAATTTGATGAAGGGAAGAGAAGTTGCAGGAAGCGATTAGATGGTCACAACCGACGGAGAAGAAAGCCCCAGCCAGTTCCTCTCACTCGTTCTTCAACTTTATTCTCCAATTACCACCAAGGGAGGCAATTGGTATCATTCTCATCAGACTCAAATATGTATGCTTCAAATGCTATGGTGAACCCTGGTTGTGACTGGGAATGGGATGGTAGGACTGGGATTTATCATAATAATAGCAGCAGTAGTAGTAGTAATAAGCAGCAGATATTTCTGGGGTCTTCTGAGAGCTCCAAAATTAAGCAAGATATGACAATGGCAACGCCGGCCTGCTCAAGCTCATTCTCATCTCCTCCATTGTGTGCTCTCTCTCTTCTGTCATCACCGCCGGCGCCCATGCACCTTTCGCAGCCTCTAGCCACCGCGGGCGCCCTCCGTGATCATAGCCTACAAGAGGCTGTGGACACTACACTTGTGGTTAGCAATGGCACTCAGCCTTCTATGTATAACTTGTTTGGCTCTAATTCTCACTCACTTCCATTTCATTGGGGATAA 1023 0.4633 MDWNMKGGSWDLSEMDERGIPNIETISVDNYNNSSSRFGIVKGSSSIISGGGEFCVDLKLGRHVSNSVTVPTGTKLKTSDGGGSKTGGSTGKRGRRMNSGNQTASCLVDGCSSDMRNCREYHRRHKVCELHSKTPVVTIGGLNQRFCQQCSRFHSLEEFDEGKRSCRKRLDGHNRRRRKPQPVPLTRSSTLFSNYHQGRQLVSFSSDSNMYASNAMVNPGCDWEWDGRTGIYHNNSSSSSSNKQQIFLGSSESSKIKQDMTMATPACSSSFSSPPLCALSLLSSPPAPMHLSQPLATAGALRDHSLQEAVDTTLVVSNGTQPSMYNLFGSNSHSLPFHWG 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi13g0456 340 MobiDBLite consensus disorder prediction 71 100 - -
Mibi13g0456 340 SUPERFAMILY SBT domain 105 182 IPR036893 GO:0003677|GO:0005634
Mibi13g0456 340 FunFam Squamosa promoter-binding-like protein 14 97 167 - -
Mibi13g0456 340 ProSiteProfiles Zinc finger SBP-type profile. 103 180 IPR004333 GO:0003677
Mibi13g0456 340 Pfam SBP domain 106 179 IPR004333 GO:0003677
Mibi13g0456 340 Gene3D - 97 167 IPR036893 GO:0003677|GO:0005634
Mibi13g0456 340 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 71 302 IPR044817 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi13g0456 Mibi-ChrMibi13 4708942 4710854 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi13g0456 1 219 SBP-box Gene Family AT5G50670 49.123 2.14e-59 193
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Mibi13g0456 SBP 2.5e-30 No_clan