Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi13g0416 ATGTTGGGAGATATCTCGTCAGGGCCGGTGATTAGCTTCACGGAATGGCTGAAGTTGATCCGCAGAAGAACCGCCAAGTATCGCTCCTCTTGCTCTCCCCACCGCCATTGGAGACCCCTTCACCCTAAGCCCGCTTCTAGCGTTGGAGAGGCAAAATGTGATACCCTTCGTGAGGAAACAACAGAAATCAATTTGTATGAAAGGCTTGGTAAAGCTGCAATGTTGGATGTTGAATCAAGCTCCTTTTCCTGGGATGGGCTATCTTCATTGCATCATGTTGAATACGACAGCAGCAATGACCGTTCTGAGGACGACATGAATAAACCTCTTGAGGTAACTGTACATTCTGGGGGACTTGTCTTCTTTGCTTTTTTCCGTCGCTTTGGGAATGATGATACTTTTCCAAAGGAGGAAGCAGCTGTTATAAAGATATCATCAACAAGAATGGCAACACAATCTGAACGTCTTGGTTATGAATTTGCCAAATGGTTGGGAGTCCGAACTCCACAGGGTCGAGTAATTCATAATACCAGTCCTGAATGGATCCAAATAAAGGATGCAGCAGAAAAAGCAAGAGATGCAGCTAATTCTGAAGGAGATGAAACTGGCAGCATGACATGTTCTGAACTTTTGGAAGCACTTGAGCTGAGCCGATGCCTCTTTTTTATGGGCTACGTACATGGGTCACCTTTACTTGAAAGTTCTAGTGCTTTTGAGTCCCAGGAATCAGTAGAAAGAAGATCAGCAGCTATTGGCAAGGTATTGATGCTAGACCTTGTTATCCGAAATGAAGATAGGCTCCCTTGCCATGAGCTTAGATGGCGTGGGAATTCTGCGAATTTGTTGTTGGCTGAAAAGGATACATCTGGAAATCCTGATACACTAGAGGAAGCTTTTGATTCTGCAATGAATATATATAGACCGAGGCTACTTCAAAAAGAAAGAAGGTTAACTTCATCGGATAGCAGATTGAGTTTTCTTAACCCTGGACTGGTATCACAAGTTTCTGATATGTCAGAGAAGGCCGAATCACCAAGATTGTCTAACATGAGCCCTCAAAGCCATACATTAAGTGAAGCATTCTTTAGTGACATCAACATTGTGGCTATTGACTCTTGTGTTCCCCGCCGACCCCCTGCTGGTAAACGTGCAATAGATCAAGCTATATATCCTAAACTGGTTGAGCTGGTGCTCAATAGTTTTGAATTTGCCTCCAATCTCTTGCATGATATAACTGGAGGTAAATTAGGATATCCTTTGCCAGAAGTCCCAAATTTAACATCTGATGTTCACTCAAATGAAACATCATCAGCTGTTCATGCATTCCGTTGTGGTTTTCGTGCTGCTCTTAGGGACCTGCAGGGATTCCATATCTTCCTTTTGACACTTCACCAGAAGCTTGATAACTTGTTAAGATCATTTATGAACATTATAAGCAAATTATCAATGGGGGAATTTGACAAAGAGGATTCACTGGTTTCACCTGACACCTCTGCACAGGTGTCTGGTGGTGGCAACTGTTCCTCTCCAACAAGTAGAGAGAGGTTTGTAAATGACAACTTTCCGGATTGTGATCTGGAATCACAGAAAACTTTTCAAAGGACATCAGGTTCTGGCAGTAGAGATACTTCTGAATTTTCTGCTATGACAAGAGAAGGTTGGCATGGGAAGTTCAGTAAAGGAAGTGGGGAACCACTTCGAAGCATCCGCTTGACAGCGCAGCTCCGTGACTTGTATAAATTTGCAAAGGTTGATGCAGAGTCCAACAAGGAATTGGAACAGTGGAATGAAATGTTAAAAAATGATGTTGTAAAGCTGTGCCAGGAAAACAATTTCAATACAGGATTTTTTGAGGGTAGCGATAATTATGGTGCCATTGATGCTTACGAACTGAAGGTCAGACTCGAGCATATTCTTGAGAGGATTGCATTGATATCCGAGGCTGCAAATTCAGAGAAGCCATCCCGTGTCACAAATTATCTGTTCATTGGTGGAGCACTGGCTGCAAGATCTTTGTACACACTTCAACAATTGGGAATCACTCATATTATGTGTTTGTGTGCCAACGAAATAGGACAATCAGATTCACAATTTCCTGATCTTTTTGCATACAAAAATTTCTTTGTATGCGATGATGAAGACTCTAACATTAGTAACATATTTGAAGAAGCTTGCGATCTAATAAGTAATGTTGAAGAAACAGGTCAGAGAATTTTAGTCCATTGCTTTGAAGGGAAAAGCAGAAGCGTTACGTTGGTCCTTGCTTACTTAATGCTCATGAAGAAATACACATTACTTGAAGCATGGAATACTATGAAAAGGGTCCACCGGCGAGCACAGCCAAACGATGGTTTTGCAAAGATCTTAATGGAACTAGATCAGAAACTGCACGGAAAAGTGTCCATGGTGTGGCAACAAAGGAAACCGATGATGAAAATTTGCCCTATATGTGGAAAGAATGTTGGACTAAGCAGCAGCTCTCTTAAGCTGCATCTGCAGAAATCGCATAAAAGACTATCATCAGGAAGTGTAGATAGTGGCACGAAAATGGAGATTGAGAAAACTTTAGCAGCTTTGAAGATTAGTCGTGGTGGAAGCGTCAGCCCCACACAAAGGCAGTCTCATTCAATCATGAATGAATAG 2643 0.4207 MLGDISSGPVISFTEWLKLIRRRTAKYRSSCSPHRHWRPLHPKPASSVGEAKCDTLREETTEINLYERLGKAAMLDVESSSFSWDGLSSLHHVEYDSSNDRSEDDMNKPLEVTVHSGGLVFFAFFRRFGNDDTFPKEEAAVIKISSTRMATQSERLGYEFAKWLGVRTPQGRVIHNTSPEWIQIKDAAEKARDAANSEGDETGSMTCSELLEALELSRCLFFMGYVHGSPLLESSSAFESQESVERRSAAIGKVLMLDLVIRNEDRLPCHELRWRGNSANLLLAEKDTSGNPDTLEEAFDSAMNIYRPRLLQKERRLTSSDSRLSFLNPGLVSQVSDMSEKAESPRLSNMSPQSHTLSEAFFSDINIVAIDSCVPRRPPAGKRAIDQAIYPKLVELVLNSFEFASNLLHDITGGKLGYPLPEVPNLTSDVHSNETSSAVHAFRCGFRAALRDLQGFHIFLLTLHQKLDNLLRSFMNIISKLSMGEFDKEDSLVSPDTSAQVSGGGNCSSPTSRERFVNDNFPDCDLESQKTFQRTSGSGSRDTSEFSAMTREGWHGKFSKGSGEPLRSIRLTAQLRDLYKFAKVDAESNKELEQWNEMLKNDVVKLCQENNFNTGFFEGSDNYGAIDAYELKVRLEHILERIALISEAANSEKPSRVTNYLFIGGALAARSLYTLQQLGITHIMCLCANEIGQSDSQFPDLFAYKNFFVCDDEDSNISNIFEEACDLISNVEETGQRILVHCFEGKSRSVTLVLAYLMLMKKYTLLEAWNTMKRVHRRAQPNDGFAKILMELDQKLHGKVSMVWQQRKPMMKICPICGKNVGLSSSSLKLHLQKSHKRLSSGSVDSGTKMEIEKTLAALKISRGGSVSPTQRQSHSIMNE 880
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi13g0416 880 Pfam Dual specificity phosphatase, catalytic domain 663 794 IPR000340 GO:0008138|GO:0016311
Mibi13g0416 880 SUPERFAMILY Protein kinase-like (PK-like) 59 388 IPR011009 -
Mibi13g0416 880 FunFam Dual specificity protein phosphatase PHS1 625 799 - -
Mibi13g0416 880 CDD DSP 654 791 - -
Mibi13g0416 880 Pfam Actin-fragmin kinase, catalytic 62 372 IPR015275 -
Mibi13g0416 880 MobiDBLite consensus disorder prediction 492 512 - -
Mibi13g0416 880 Gene3D - 230 480 IPR036940 GO:0016301
Mibi13g0416 880 ProSiteProfiles Dual specificity protein phosphatase domain profile. 653 798 IPR020422 GO:0006470|GO:0008138
Mibi13g0416 880 MobiDBLite consensus disorder prediction 493 512 - -
Mibi13g0416 880 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 722 774 IPR000387 GO:0016311|GO:0016791
Mibi13g0416 880 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 653 798 IPR029021 -
Mibi13g0416 880 Gene3D Protein tyrosine phosphatase superfamily 631 799 IPR029021 -
Mibi13g0416 880 PANTHER DUAL SPECIFICITY PROTEIN PHOSPHATASE PHS1 1 879 IPR035010 GO:0004721|GO:0009737|GO:0043622
Mibi13g0416 880 SMART dsp_5 653 795 IPR020422 GO:0006470|GO:0008138
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi13g0416 Mibi-ChrMibi13 4182538 4189689 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi13g0416 1 864 Protein tyrosine phosphatase (PTP) family AT5G23720 61.206 0.0 1016