Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi13g0414 ATGGACTGTAAAACATGGAACACCTCCATAGCTATGGCTCTAGTGTTGCTTCACTTGAGCTTAATTATGCCTGTCTTATCTTTCTCTTCTCACCCAGATAGGATCCTACGGCTTCCTGGACAACCCCACGTAGGATTTCGACAATTTTCAGGATATGTCACAGTGGATGACAAGAAAGATAAAGCTTTGTTCTACTATTTTGTTGAATCTGAATATGATCCTGCTTCTAAGCCTCTTGTTCTCTGGCTCAATGGAGGACCTGGCTGTTCTTCACTTGGGGTTGGAGCATTCTCTGAAAATGGACCCTTTAGACCAAATGGTGAAGTTCTGATTAAAAATGATTACAGTTGGAACAAAGAGGCAAACATGCTATATTTGGAGACACCAATTGGAGTGGGATACTCTTATGCGAAGGACGGATATATGAGAGTTGGCGATAAGGAAACTGCCAGGGACAACCTCATGTTTCTGAAACTCTGGTTCAACAAGTTCCCTCAATACAGGCAAAGAGATTTGTTTCTTACTGGTGAAAGTTATGCCGGGCATTATGTTCCTCAACTTGCAAAGCTTATGATTGACTTCAACCAGAAGGAAAAGATATTTAATCTTAAAGGCATAGCTTTGGGTAATCCAGTTCTAGAATACGCCACAGATTTCAACTCAAGGGCTGAGTTCTTCTGGTCTCATGGATTAATATCAGATACAACGTACAAAATGTTCACATCAATGTGTAATTATTCTCGGTACGTTAGTGAGTACTATAGAAACTCAGTTTCGCCTATTTGTTCAAAGGTTATGAGCCAAGTAAGCACAGAAACAAGCAAATTCGTGGACAAATATGATGTGACACTTGATGTTTGCATTTCCTCAGTTCTTTCACAGTCTAAGGCTATTTGTCCTCAAACACAAGAAAAAAGTGAGAGGATTGACGTATGTGTCGATGATAAAGTTATAAATTACTTGAATCGAAGAGATGTTCAAGAGGCACTTCATGCCAAACTTGTTGGAGTTCGCAAGTGGGATGTCTGTAGCAACGTCCTGGACTATGATATGCTCAATCTGGAAATACCTACGCTTCCTGTTGTTGGGTCAATAGTCAAAGCTGGAGTTCATGTCTTAATTTACAGTGGAGATCAAGATTCTGTAATTCCACTAACTGGTAGCCGTACCTTGGTTCAGAAACTAGCAAGACAATTAGCACTGAATACTACTGTTCCTTACAGAGTATGGTTCGAAGGCCAACAGGTTGGTGGGTGGACTCAAGTATATGGAGATAATAAGCTGTCATTTGCAACCATAAGAGGTGCTTCTCATGAAGCTCCTTTCTCGCAGCCTGAAAGATCGCTGACTCTGTTCAAGTCATTCTTGCTAGGCAGGCCTTTACCTGCTGATATTTTCTGA 1401 0.409 MDCKTWNTSIAMALVLLHLSLIMPVLSFSSHPDRILRLPGQPHVGFRQFSGYVTVDDKKDKALFYYFVESEYDPASKPLVLWLNGGPGCSSLGVGAFSENGPFRPNGEVLIKNDYSWNKEANMLYLETPIGVGYSYAKDGYMRVGDKETARDNLMFLKLWFNKFPQYRQRDLFLTGESYAGHYVPQLAKLMIDFNQKEKIFNLKGIALGNPVLEYATDFNSRAEFFWSHGLISDTTYKMFTSMCNYSRYVSEYYRNSVSPICSKVMSQVSTETSKFVDKYDVTLDVCISSVLSQSKAICPQTQEKSERIDVCVDDKVINYLNRRDVQEALHAKLVGVRKWDVCSNVLDYDMLNLEIPTLPVVGSIVKAGVHVLIYSGDQDSVIPLTGSRTLVQKLARQLALNTTVPYRVWFEGQQVGGWTQVYGDNKLSFATIRGASHEAPFSQPERSLTLFKSFLLGRPLPADIF 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi13g0414 466 Pfam Serine carboxypeptidase 40 457 IPR001563 GO:0004185|GO:0006508
Mibi13g0414 466 FunFam Carboxypeptidase 28 462 - -
Mibi13g0414 466 Gene3D - 312 348 - -
Mibi13g0414 466 SUPERFAMILY alpha/beta-Hydrolases 37 462 IPR029058 -
Mibi13g0414 466 ProSitePatterns Serine carboxypeptidases, histidine active site. 428 445 IPR033124 GO:0004185
Mibi13g0414 466 Gene3D - 358 458 - -
Mibi13g0414 466 ProSitePatterns Serine carboxypeptidases, serine active site. 174 181 IPR018202 GO:0004185
Mibi13g0414 466 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 36 445 IPR001563 GO:0004185|GO:0006508
Mibi13g0414 466 FunFam Carboxypeptidase 358 458 - -
Mibi13g0414 466 Gene3D alpha/beta hydrolase 30 289 IPR029058 -
Mibi13g0414 466 PRINTS Carboxypeptidase C serine protease (S10) family signature 113 125 IPR001563 GO:0004185|GO:0006508
Mibi13g0414 466 PRINTS Carboxypeptidase C serine protease (S10) family signature 126 136 IPR001563 GO:0004185|GO:0006508
Mibi13g0414 466 PRINTS Carboxypeptidase C serine protease (S10) family signature 428 441 IPR001563 GO:0004185|GO:0006508
Mibi13g0414 466 PRINTS Carboxypeptidase C serine protease (S10) family signature 160 185 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi13g0414 Mibi-ChrMibi13 4170292 4173291 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi13g0414 320 461 Calmodulin-binding Proteins AT2G22960 29.577 5.87e-15 71.2