Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi13g0407 ATGAAAACAACAACAGACGCCTCCGATATCATCACCCTTCTTTCCTCTCTTCTCTGCGAAATCCCAACCAGTCTCCACTTCAAAGGCAAATGGTCCCTCTTCACTTCCAAACTCCACCTTCTCCATTCTCTCCTCTCCAACTTCCCTCTCTCCTCAAATTCTCTCTCCTCCGACCTTCTTCTCTCCATATCCACCACCCTCAACGACGCCCTTTCCCTCCTCAAACATTCCCACCTCCCTTCCTTACCCCACGGAAAGCTCCAAACCCAAAACCTCATCGATTCCCTCCTCGCCACACTCGATCAACATCTCTCTGACTGTGATGTTCTCCTCAAAAGTGGCCTCCTCGTAAACGACGCCGTTTCGAATGCGTCTAACAAGGACGCTGTTCGATCTGAATGTAGGATTTTAACCGCTCGTTTGCAAATTGGGTCCTCTCATTCTAGGATTTCTGCTATCGAAACGTTTCTGGGTTTATTGCATGAGGATGATAAGAATGTGGTTGTTGCTGTGGCTCAGGGTTTGGTTCCTGTGCTCCTTCGCTTACTGGATTCTAGCTCTTTTGAAATGAAGGAGAAGGTTGTTGCTGCGATTTCAAGGGTTTCTACGGTGGATAGTTGTAAGCATGCGTTGATTTCTGAAGGTTTGGTGCTTTTGAATCATCTGCTTCGTGTTCTTGACCATGGGAGTGGGTTTGCTAAAGAGAAAGCCTGTGTTGCTCTTCAAGCTTTGACTTTTTCTAAGGAGAATGCGAGGGCAATTGGGTGTAGAGGTGGGGTTTCTTCTTTATTGGATATTTGTCAAGTAGGTACTCCTGGTTCTCAAGCTTCTGCTGCTAGTGTTCTGAGGAATCTCGCGGTTTTTCCTGAAGTTAGAGAGAATTTCGTGGAGGAAAATGCTGTTGTTGTTCTGTTAGGGCTAGCTTCTTCTGGTACTGCAATAGCACAAGAAAATGCAATCGGTTGTTTGTCTAATCTAATTTCCGAGGATGAAAGCTTGAGACTAATCACTGTTAAGGAAGGAGGGATTGACTGTTTGAAGAATTTCTGGGACTCACCTCCGTCTGTTCAGAGTCTAGAGGTAGCAATTGAGTTATTGAGAAGCCTTGCTTTGAGTCCAGTGATTGCTCAAGTTCTTATTTCAGATGGGTTTATTCAGAGACTAGTGGGACTGTTAAGTTGTGGTGTACTTAGGGTGAGAATTGCAGCTGCTCGAGCTGTTTATGCTCTTGGGTCCAGCACCACGAAGGCCAAGAAGGAGATGGGTGAATGTGGATGCATTAGTCCATTGATACAGATGCTAGATGGCAAAGCTGTTGAAGAGAAGGAAGCAGCTTCAATGGCTTTATCAACACTTTTGTTATATGCAGGCAATAGAAGGATTTTCCGGAAGGATGAGAGGGGTATTGTGAGTGTGGTTCAGCTTTTGGATCTTTCAATACGGAATTTGGATAAGAAATACCCAGTTTCTGTTCTGTTGTCACTTGTGCATTCTAAGACTTGTAGAAAACAGATTGCGGCAGCTGGTGCTGGTGTACATACACGAAGACTTGTAGAGATGAATGTTGAGGGATCTAAGAAACTCTTGGATAGCCTTGGTCGTGCGAAGATATGGGAAGCATTTGCAAGATCTTTGGGATAG 1641 0.4497 MKTTTDASDIITLLSSLLCEIPTSLHFKGKWSLFTSKLHLLHSLLSNFPLSSNSLSSDLLLSISTTLNDALSLLKHSHLPSLPHGKLQTQNLIDSLLATLDQHLSDCDVLLKSGLLVNDAVSNASNKDAVRSECRILTARLQIGSSHSRISAIETFLGLLHEDDKNVVVAVAQGLVPVLLRLLDSSSFEMKEKVVAAISRVSTVDSCKHALISEGLVLLNHLLRVLDHGSGFAKEKACVALQALTFSKENARAIGCRGGVSSLLDICQVGTPGSQASAASVLRNLAVFPEVRENFVEENAVVVLLGLASSGTAIAQENAIGCLSNLISEDESLRLITVKEGGIDCLKNFWDSPPSVQSLEVAIELLRSLALSPVIAQVLISDGFIQRLVGLLSCGVLRVRIAAARAVYALGSSTTKAKKEMGECGCISPLIQMLDGKAVEEKEAASMALSTLLLYAGNRRIFRKDERGIVSVVQLLDLSIRNLDKKYPVSVLLSLVHSKTCRKQIAAAGAGVHTRRLVEMNVEGSKKLLDSLGRAKIWEAFARSLG 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi13g0407 546 Gene3D - 352 532 IPR011989 -
Mibi13g0407 546 Gene3D - 123 351 IPR011989 -
Mibi13g0407 546 SMART arm_5 330 371 IPR000225 GO:0005515
Mibi13g0407 546 SMART arm_5 414 454 IPR000225 GO:0005515
Mibi13g0407 546 SMART arm_5 247 287 IPR000225 GO:0005515
Mibi13g0407 546 SMART arm_5 372 412 IPR000225 GO:0005515
Mibi13g0407 546 SMART arm_5 288 328 IPR000225 GO:0005515
Mibi13g0407 546 SMART arm_5 163 203 IPR000225 GO:0005515
Mibi13g0407 546 Pfam Armadillo/beta-catenin-like repeat 163 200 IPR000225 GO:0005515
Mibi13g0407 546 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 12 542 - -
Mibi13g0407 546 SUPERFAMILY ARM repeat 133 482 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi13g0407 Mibi-ChrMibi13 4102565 4104205 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi13g0407 120 403 U-box Gene Family AT2G23140 28.223 1.85e-15 77.4