Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi13g0359 ATGGATAAGTACGAGGAGGTGAAGGATTTGGGGGCTGGCAATTTTGGGGTGGCTAGGCTCATGAGGAACAAGGAGACCAAGGAGCTCGTCGCCATGAAATATATCGAGCGTGGTCGCAAGATTGATGAGAACGTGGCTAGAGAGATTATGAACCACAGGTCCCTGCGGCACCCCAATATAATTCGATTTAAGGAGGTCATTTTGACCCCAACACATTTAGCAATAGTAATGGAGTATGCAGCTGGAGGGGAGCTATTTGAGAGGATATGCAATGCTGGCAGATTCAGTGAAGACGAGGCTAGATATTTCTTTCAGCAGCTCATATCTGGTGTTCATTTCTGTCACGCCATGCAAATATGCCACAGAGATTTGAAGCTTGAAAATACCCTTTTGGATGGAAGTCCTGCACCCCGCTTGAAAATTTGTGATTTTGGTTATTCCAAGTCATCTTTGCTGCATTCAAGACCCAAGTCTACGGTTGGAACTCCAGCTTATATAGCTCCCGAAGTTCTTTCTAGGCACGAGTATGATGGCAAGTTGGCTGATGTGTGGTCATGTGGAGTGACTCTTTATGTCATGCTTGTTGGAGCGTATCCCTTTGAGGACCAAGATGACCCCAGGAATTTCCGGAAAACAATCCAGCGAATAATGGCTGTTCAATACAAAATCCCAGATTATGTTCACATATCTCCAGATTGCAGGCACCTCCTCTCTCGTATTTTTGTGGCTAATCCATTAAGGAGAATAGCACTCAAGGAAATTAAGGTCCACCCATGGTTTCTGAAGAATCTACCAAGGGAACTAACTGAATCTGCACAGGCAGTGTACTATCAGAGAGACAATCCTAGCTTTTATTCTCAGAGTGCAGAGGAAATAATGAGAATTGTTGGGGAGGCAAGAACCCCAGAGCCAGTATCAAGGCCGGTCAAAGGTTTTGGCTGGGAAGGTGAAGAAGAAGAAGGAGCAGAAGAGGAGGTGGAGGAGGAAGACGAAGACGAAGAAGATGAGTATGACAAGAGGGTGAAGGAGGTTCACGCTAGCGGAGAATTCCATGTCAGTTGA 1062 0.4576 MDKYEEVKDLGAGNFGVARLMRNKETKELVAMKYIERGRKIDENVAREIMNHRSLRHPNIIRFKEVILTPTHLAIVMEYAAGGELFERICNAGRFSEDEARYFFQQLISGVHFCHAMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRHEYDGKLADVWSCGVTLYVMLVGAYPFEDQDDPRNFRKTIQRIMAVQYKIPDYVHISPDCRHLLSRIFVANPLRRIALKEIKVHPWFLKNLPRELTESAQAVYYQRDNPSFYSQSAEEIMRIVGEARTPEPVSRPVKGFGWEGEEEEGAEEEVEEEDEDEEDEYDKRVKEVHASGEFHVS 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi13g0359 353 Gene3D Phosphorylase Kinase; domain 1 1 79 - -
Mibi13g0359 353 MobiDBLite consensus disorder prediction 317 337 - -
Mibi13g0359 353 ProSiteProfiles Protein kinase domain profile. 4 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi13g0359 353 SUPERFAMILY Protein kinase-like (PK-like) 2 298 IPR011009 -
Mibi13g0359 353 FunFam Serine/threonine-protein kinase SRK2E 1 79 - -
Mibi13g0359 353 Pfam Protein kinase domain 4 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi13g0359 353 ProSitePatterns Protein kinases ATP-binding region signature. 10 33 IPR017441 GO:0005524
Mibi13g0359 353 FunFam Serine/threonine-protein kinase SRK2A 80 268 - -
Mibi13g0359 353 SMART serkin_6 4 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi13g0359 353 PANTHER SERINE/THREONINE KINASE 3 306 - -
Mibi13g0359 353 ProSitePatterns Serine/Threonine protein kinases active-site signature. 119 131 IPR008271 GO:0004672|GO:0006468
Mibi13g0359 353 Gene3D Transferase(Phosphotransferase) domain 1 80 268 - -
Mibi13g0359 353 CDD STKc_SnRK2 3 259 - -
Mibi13g0359 353 MobiDBLite consensus disorder prediction 338 353 - -
Mibi13g0359 353 MobiDBLite consensus disorder prediction 303 353 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi13g0359 Mibi-ChrMibi13 3602709 3605320 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi13g0359 3 282 CBL-interacting serine-threonine protein kinases AT4G24400 41.156 1.55e-66 214
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Mibi13g0359 Pkinase 3.9e-69 CL0016