Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi13g0349 ATGATATATATACACACATATATTTTCCCAGGTGAATATTCCTCGAAGATCGAAGAGGCTTGTATTCCACTAAAGCAAATGACCAGGTGGCTGGTATTCTTGGCCATCTTAGGACTCAGCTGTGCAACTACTGGTCCTGATGTGGAAGGTGAAGCTTTGTTAGATTTTTTGAAGGTCCTCAATGATTCTAACCATCAGATAACAGATTGGGATTGTTTTCTTGTGAGCCCTTGCTTTAGTTGGTCTCATGTCACATGTAGAGATGGACATGTCATATCTCTGAGCTTGGGTTCTAAAGGATTTTCTGGAACACTATCTCCTTCAATTACCAACCTGAAATACTTGATTTCCTTGGAATTGCAGAACAATAGCCTTTCAGGTTTCTTACCTGATTATATTGCCAACTTGACGCGCCTGCAATATTTAAATCTTGGTGACAATAATTTCAATGGTTCTATACCATCTACATGGGGCCAACTTTCCTCTCTGAGGACTCTGGTATTGAGAGGGAATAACTTGTCTGGATCCATAACCAATTCTGTTGAAAATCTTAATGGATTATCAGAATTGGATCTTTCTTCTAATAATTTAACTGGAACCATCCCAAAGCACCTCTTTTCACTCCCAATCTTCAACTTTTCATATACGGACCTTCATTGTGGCTCTAGCTTGGATCAGCCTTGTGTTTCTAATTCAGCTATTCCAGCTTCAGACAACAAATCAAAAGTTGCTGTGGCTTTAAGTTTAGCAATTTGTGGCGCCTTTGGAATTCTGTGTCTAGGGATCTTCTTTACATATGCATACCAATATATTCAAAGACACAAAAATGATGTTTTTGTTGATGTTTCAGGTGAAGATGAGAGCAAGATCTCATTTGGGCAACTGAGAAGATTTTCTTTGCGTGAACTTCATCTAGCCACAAAAAATTTCAGCGAAGGCAACGTGATTGGCCAAGGAGGCTTTGGAAAAGTATACAAAGGAGTACTCTCAGACAATACAAAGATTGCAGTAAAATGCCTGGCTGATTATCACAATCCTGGTGGAGAGGCTGCTTTCCAAAGAGAAGTTCAACTCATAAGCGTCGCAGTTCATAGAAATCTCCTGCATTTGATCGGGTTCTGTACAACTTCAACCGAAAGAATCCTCGTATATCCTTTCATGGAAAATCGAAGTGTTGCATATCGTTTGAGAGATTTGAAGCCTGAAGAGAAAGGTCTGGATTGGCCAACAAGGAAACGCATAGCATTTGGTACAGCACATGGATTGGAGTATTTGCATGAGCAGTGTAATCCTAAGATCATACATCGCGATTTAAAGGCAGCAAATATACTATTAGATGATGAATTTGAAGCAGTTCTTGGAGATTTTGGGCTGGCTAAGCTGGTTGACACAAGACTGACTAGTGTCACCACTCAAGTGAGGGGTACCATGGGACATATAGCCCCAGAATACTTGTCCACAGGAAAATCATCAGAGAAAACAGATGTCTTTGGATATGGCATAACACTTCTTGAAATCGTGACAGGTCAACGAGCCATCGACTTCTCCCGGCTTGAAGAAGAGGAGGATGTTCTTCTGCTAGATCATATTAAGAAGATGCTGAGAGAGAAGAGGATAAAGGACATAGTGGATAAGAGTTTGGAGAGATATGATGGAAATGAAGTGGAGAGGATAATTCAGGTTGCCTTGCTTTGCACGCAAGGCTCACCGGAAGATCGGCCAAGCATGTCAGAGGTGGTGAATTTGCTGAAAGGGGAAAGTTTGGAGGATAGATGGGCTGAGTGGGAGCTAATGGAAGATATGAATGAGAGGGAAATGTCACTGTTAGACCATCAATTTGCTTGGGCTGATGAATCTACGCATGATCAAGAAGCAATTCAGCTTTCCTGGGCAAGATAA 1899 0.4107 MIYIHTYIFPGEYSSKIEEACIPLKQMTRWLVFLAILGLSCATTGPDVEGEALLDFLKVLNDSNHQITDWDCFLVSPCFSWSHVTCRDGHVISLSLGSKGFSGTLSPSITNLKYLISLELQNNSLSGFLPDYIANLTRLQYLNLGDNNFNGSIPSTWGQLSSLRTLVLRGNNLSGSITNSVENLNGLSELDLSSNNLTGTIPKHLFSLPIFNFSYTDLHCGSSLDQPCVSNSAIPASDNKSKVAVALSLAICGAFGILCLGIFFTYAYQYIQRHKNDVFVDVSGEDESKISFGQLRRFSLRELHLATKNFSEGNVIGQGGFGKVYKGVLSDNTKIAVKCLADYHNPGGEAAFQREVQLISVAVHRNLLHLIGFCTTSTERILVYPFMENRSVAYRLRDLKPEEKGLDWPTRKRIAFGTAHGLEYLHEQCNPKIIHRDLKAANILLDDEFEAVLGDFGLAKLVDTRLTSVTTQVRGTMGHIAPEYLSTGKSSEKTDVFGYGITLLEIVTGQRAIDFSRLEEEEDVLLLDHIKKMLREKRIKDIVDKSLERYDGNEVERIIQVALLCTQGSPEDRPSMSEVVNLLKGESLEDRWAEWELMEDMNEREMSLLDHQFAWADESTHDQEAIQLSWAR 632
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi13g0349 632 SUPERFAMILY Protein kinase-like (PK-like) 288 583 IPR011009 -
Mibi13g0349 632 SUPERFAMILY L domain-like 49 220 - -
Mibi13g0349 632 Pfam Leucine rich repeat N-terminal domain 48 86 IPR013210 -
Mibi13g0349 632 Gene3D Ribonuclease Inhibitor 46 230 IPR032675 -
Mibi13g0349 632 ProSitePatterns Protein kinases ATP-binding region signature. 316 338 IPR017441 GO:0005524
Mibi13g0349 632 Gene3D Phosphorylase Kinase; domain 1 279 386 - -
Mibi13g0349 632 FunFam Somatic embryogenesis receptor kinase 1 279 386 - -
Mibi13g0349 632 Pfam Protein kinase domain 311 581 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi13g0349 632 Gene3D Transferase(Phosphotransferase) domain 1 387 602 - -
Mibi13g0349 632 FunFam Somatic embryogenesis receptor-like kinase 1 387 603 - -
Mibi13g0349 632 SMART serkin_6 310 583 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi13g0349 632 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 30 593 - -
Mibi13g0349 632 ProSitePatterns Serine/Threonine protein kinases active-site signature. 433 445 IPR008271 GO:0004672|GO:0006468
Mibi13g0349 632 ProSiteProfiles Protein kinase domain profile. 310 588 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi13g0349 632 FunFam Leucine-rich repeat receptor-like protein kinase 46 203 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi13g0349 Mibi-ChrMibi13 3529728 3532787 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi13g0349 27 632 Receptor kinase-like Gene Family AT5G10290 56.956 0.0 659
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Mibi13g0349 Pkinase 1.7e-44 CL0016