Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi13g0343 ATGGGAGATGGCAACAATCGCTCTAACCACAGTAATAAGCCTGAGTGGCTTCAACAGTACGATCTGATTGGGAAAATTGGTGAAGGTACCTATGGTCTTGTCTTCCTCGCTAGGATCAAGTCTGCTACCAATCGTGGAAAATCAATTGCCATCAAGAAATTCAAGCAGTCCAAGGATGGCGATGGAGTCTCCCCCACCGCTATCCGTGAAATCATGTTACTCAGGGAGATAACGCACGAAAATGTCGTGAAGCTTGTAAATGTTCACATCAATCATGCGGATATGTCTCTGTACCTAGCTTTTGATTATGCTGAACATGACCTTTATGAAATCATTCGACATCACAGGGACAAAGTCAACCATGCTATTAATCAATATACTGTTAAATCATTACTTTGGCAGTTGCTTAACGGACTAAACTATCTGCATAGTAACTGGATAATTCATCGAGACCTTAAGCCATCGAATATATTGGTTATGGGTGATGGAGAGGAACACGGAGTTGTGAAAATTGCTGACTTTGGACTTGCAAGGATATATCAGGCCCCTTTAAAGCCATTATCTGACAATGGAGTTGTTGTTACCATATGGTATCGTGCACCTGAGTTGCTTCTTGGGGCAAAACATTATACCAGTGCCGTCGATATGTGGGCTGTTGGATGCATTTTTGCTGAGCTGTTAACTCTAAAGCCACTATTTCAAGGAGCAGAAGTCAAAGCCACACCTAATCCATTTCAGCTTGATCAACTTGACAAGATATTCAAGGTTTTAGGCCATCCCACATTAGAAAAGTGGCCCACCCTGGCATATCTTCCCCATTGGCAATCAGATCTTCAGCATATCCAAGGGCACAAATATGAGAACACTAGCCTTTGTAATGTTGTACACCTACCTCCAAAAAGTCCTGCTTATGATCTCCTATCAAAGATGCTTGAATATGATCCTCGAAAGAGGATAACAGCAGCGCAAGCTTTGGAACATGAGTATTTCAAAATGGAACCACTGCCTGGGCGGAATGCTCTTGTGCCCTGCCAACCTGGAGAGAAAATGGTGAATTATCCCACTCGTCCAGTTGACTCAACAGTAGATTTTGAAGGGACAACCAATTTGCAACCTTCTCAAACGGTATCATCTGGAAATGCTGTTTCTGGCGGTATGGCAGGCGGTCATTTATCAAATAGATCTGTCCCTCGGCCAATGAATGTTATGGGCATGCCGAGGATGCCGCCTATGCAAGCTTATAATCTTGCATCCCAGGCAGGGATGGGTGGTAGTATGCCTATGCCACGAGGTGTTGCACAGGGTCATCAGATGAGAAGAAAAGACGGGGGATTGATGTTGCCTGGACACCCTCCACAGCAAAAGTCAAGGCGTAATTGA 1380 0.442 MGDGNNRSNHSNKPEWLQQYDLIGKIGEGTYGLVFLARIKSATNRGKSIAIKKFKQSKDGDGVSPTAIREIMLLREITHENVVKLVNVHINHADMSLYLAFDYAEHDLYEIIRHHRDKVNHAINQYTVKSLLWQLLNGLNYLHSNWIIHRDLKPSNILVMGDGEEHGVVKIADFGLARIYQAPLKPLSDNGVVVTIWYRAPELLLGAKHYTSAVDMWAVGCIFAELLTLKPLFQGAEVKATPNPFQLDQLDKIFKVLGHPTLEKWPTLAYLPHWQSDLQHIQGHKYENTSLCNVVHLPPKSPAYDLLSKMLEYDPRKRITAAQALEHEYFKMEPLPGRNALVPCQPGEKMVNYPTRPVDSTVDFEGTTNLQPSQTVSSGNAVSGGMAGGHLSNRSVPRPMNVMGMPRMPPMQAYNLASQAGMGGSMPMPRGVAQGHQMRRKDGGLMLPGHPPQQKSRRN 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi13g0343 459 ProSiteProfiles Protein kinase domain profile. 20 330 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi13g0343 459 MobiDBLite consensus disorder prediction 431 459 - -
Mibi13g0343 459 SUPERFAMILY Protein kinase-like (PK-like) 15 332 IPR011009 -
Mibi13g0343 459 ProSitePatterns Protein kinases ATP-binding region signature. 26 53 IPR017441 GO:0005524
Mibi13g0343 459 FunFam Cyclin-dependent kinase e-1 8 103 - -
Mibi13g0343 459 Gene3D Phosphorylase Kinase; domain 1 5 103 - -
Mibi13g0343 459 PANTHER CELL DIVISION PROTEIN KINASE 18 336 - -
Mibi13g0343 459 Pfam Protein kinase domain 20 330 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi13g0343 459 FunFam Putative cyclin-dependent kinase E-1 104 343 - -
Mibi13g0343 459 CDD STKc_CDK8_like 19 330 - -
Mibi13g0343 459 SMART serkin_6 20 330 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi13g0343 459 ProSitePatterns Serine/Threonine protein kinases active-site signature. 147 159 IPR008271 GO:0004672|GO:0006468
Mibi13g0343 459 Gene3D Transferase(Phosphotransferase) domain 1 104 345 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi13g0343 Mibi-ChrMibi13 3471372 3477415 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi13g0343 1 458 Core Cell Cycle Gene Families AT5G63610 75.424 0.0 710
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CDK8 Mibi13g0343 Pkinase 2.1e-68 CL0016