Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi13g0341 ATGTCAGCACCTGATCTCTTTTTGTCAGAAATGGTAAAGGAAGAAGCCATCAATGACAGTTCCTCCAATGTTGAGACTGAGGATTTGGAATCTCACTCTCAACATAGTCCTGAGAAGGAAATGGGCTGCACGAGGATGAATTGTCGTGTGTGCCAGTGTGCTGAATCTGATAAGAGGGGAGATATCGCACTAGAATTTTTGGGCATTGCTCCAGTTTTAGAATCTGATGCAAGTAATGCCGAAGAAAGGTCAGATTGTGAGGGAATTTCCAAAAATGCATCTCTTAAAAGAAATGTGGGAAGTAAATCTGGGGTTGTGGAGTTTGTAAGCCCTGATGGAGAGGTATTTATTTGCAAAACTGATGTAGAGATGGGTCTTTCTCATCGAGACACACTTATTGAACTTGGCTGCTGTTGTAAAAATGACCTTGCTGCTGTACACTATGCTTGTGCTCTTAAATGGTTCGTCAATCATGGATCTACTATCTGTGAAATATGTGGACATATTGCAAAAAATATCAGAATTACCGACTTCAATAAGGTTGTTGCTTCTTTGAAAGATTATGAATCATTGAGGGAAAGAACCGCCATTGGGCAACCGAGTCCTGCTCAAGTTCATGCAAGTACTGGTGTTGATCCTGATGCTGTGGCTGCTATCAGGAGGCAACGGCTAAGTGAAATTGCACTATGGTTTTGTCCCCGTAATAACAGTAACACCAACAATGTGGACACGGTCTCACCAGTTGTTTCTGAACAACCTTTAAATAATGTTACCGAAGATGCTGCACCTGTTCAAAATCCTGCAACTAAGTGGGCAGTGGAAGTTACTGGGATCCTGCTTGCTACTGGGCTACTTACTGTCACCCTTGCATGGCTCATAGCTCCTCGTGTTGGAAAGAAAACTGCAAGAAGTGGTCTTCATATTCTACTTGGAGGTATATGCGCTTTAACGGTTGTGGTTTTCTTCCGCTTTTTCGTGCTCACCAGAATCAAGTATGGACCTGCACGTTACTGGGCGATTTTGTTCATTTTCTGGTTTCTTGTGTTTGGAATATGGGCTTCACGGACACATAATGCTCATACGACGTGA 1089 0.4279 MSAPDLFLSEMVKEEAINDSSSNVETEDLESHSQHSPEKEMGCTRMNCRVCQCAESDKRGDIALEFLGIAPVLESDASNAEERSDCEGISKNASLKRNVGSKSGVVEFVSPDGEVFICKTDVEMGLSHRDTLIELGCCCKNDLAAVHYACALKWFVNHGSTICEICGHIAKNIRITDFNKVVASLKDYESLRERTAIGQPSPAQVHASTGVDPDAVAAIRRQRLSEIALWFCPRNNSNTNNVDTVSPVVSEQPLNNVTEDAAPVQNPATKWAVEVTGILLATGLLTVTLAWLIAPRVGKKTARSGLHILLGGICALTVVVFFRFFVLTRIKYGPARYWAILFIFWFLVFGIWASRTHNAHTT 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi13g0341 362 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 114 169 IPR013083 -
Mibi13g0341 362 ProSiteProfiles Zinc finger RING-CH-type profile. 107 173 IPR011016 GO:0008270
Mibi13g0341 362 SUPERFAMILY RING/U-box 131 169 - -
Mibi13g0341 362 Pfam RING-variant domain 132 166 IPR011016 GO:0008270
Mibi13g0341 362 SMART ringv_2 117 167 IPR011016 GO:0008270
Mibi13g0341 362 MobiDBLite consensus disorder prediction 16 39 - -
Mibi13g0341 362 MobiDBLite consensus disorder prediction 25 39 - -
Mibi13g0341 362 PANTHER ZINC FINGER, RING-CH-TYPE 20 329 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi13g0341 Mibi-ChrMibi13 3429442 3431682 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi13g0341 18 352 C3H Transcription Factor Family AT5G08750 62.644 4.47e-144 410