Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi13g0339 ATGAAGGGTGAATTAGAGTTACCACCTGGATTCAGATTTCACCCCACGGATGAGGAGTTGGTGAAGCACTATCTCTGTAGGAAATGTGCTTCCCAGTCTATTTCTGCTTCCATTATCAAAGAGATTGATTTGTATAAGTTTGATCCTTGGCAGCTTCCAGAAATGACGCAATCTGGAGAGAAAGAATGGTACTTTTTCTCACCAAGGGACAGAAAATACCCAAACGGATCAAGACCAAACAGAGCCGCCGGAAGTGGGTACTGGAAGGCCACCGGAGCCGACAAGGCCATTGGGAAACCAAAGCCTTTGGGAATAAAGAAGGCCCTCGTCTTTTACGCCGGTAAAGCCCCCAAAGGCACCAAAACCAATTGGATCATGCACGAATATCGCCTCGCCAATGTGGATCGCTCCGCTCGCAACAACAACAACCTTAGGCTTGATGATTGGGTATTGTGTCGGATTTACAACAAGAAAGGTGTGATTGAGAAATACAACGGCCAGGATCAGAAACAGAGCGGGTTTGTTTCGTCAGATGTGGATGAGCACGAAACTAAACCGGAAATCAACATGGTCGCCGATGACCAATTGTTCATGGACACGTCGGAATCGGTGCCGAGGTTGCACACGGATTCCAGTGGCTCCGAGCACGTGACCTCGCCGGACGTCACGTGCTGCGATAAGGAGGTTCAGAGTGAGCCTAAGTGGAATGAGTTGGCCCTGGGATTGAAAGATGACGCGATTGATTTTGAGTTAAACAATTACATGGACAATTTCAATAGTGGCTTCACTGGATATGACGCTTTTGCCCCTCAGTTCCAATACCAAAACCAAATGAACCAGCTCTCGCCATTACAGGACATGTTCATGTATCTTCAGAAACCATTCTAA 888 0.473 MKGELELPPGFRFHPTDEELVKHYLCRKCASQSISASIIKEIDLYKFDPWQLPEMTQSGEKEWYFFSPRDRKYPNGSRPNRAAGSGYWKATGADKAIGKPKPLGIKKALVFYAGKAPKGTKTNWIMHEYRLANVDRSARNNNNLRLDDWVLCRIYNKKGVIEKYNGQDQKQSGFVSSDVDEHETKPEINMVADDQLFMDTSESVPRLHTDSSGSEHVTSPDVTCCDKEVQSEPKWNELALGLKDDAIDFELNNYMDNFNSGFTGYDAFAPQFQYQNQMNQLSPLQDMFMYLQKPF 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi13g0339 295 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 6 214 - -
Mibi13g0339 295 SUPERFAMILY NAC domain 3 157 IPR036093 GO:0003677|GO:0006355
Mibi13g0339 295 Pfam No apical meristem (NAM) protein 8 131 IPR003441 GO:0003677|GO:0006355
Mibi13g0339 295 Gene3D NAC domain 16 161 IPR036093 GO:0003677|GO:0006355
Mibi13g0339 295 ProSiteProfiles NAC domain profile. 7 157 IPR003441 GO:0003677|GO:0006355
Mibi13g0339 295 FunFam NAC transcription factor 16 161 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi13g0339 Mibi-ChrMibi13 3424237 3425547 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi13g0339 1 295 NAC Transcription Factor Family AT1G01720 60.714 1.64e-120 345
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mibi13g0339 NAM 6.5e-40 No_clan