Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi13g0328 ATGGAAGTTGATCTTGATAGCTTCGATCTTCTCGAACTTGATTTAAGGGACTTTGTTTTACCTGGCTTTGAGGAATTTTCAGTTAACATACCTCTTGATTTAGAAGAGTTGGGATGGGAATATTTCCAATGTTTCTCAGATGAAAGCCGCATTTGTGAATTTGAGGATAAAACACTACAACAACCTGCAAATAAAGCTGTGAACTGTCAAAATGCAATAAGTGGGTTTAAGAGGAGGAAGGGTAGGAAGAAGAAGACGAAAGCTAGGCAAAACGCAGTTTTGATCGAAAGAAAGAGGTGTAGCCATTGTAAGTCTGATGACACACCTCAATGGAGGCTTGGTCCTAATGGACCCAAGACATTATGCAATGCATGTGGTGTTAGGTTCAAGTCCGGAAGGTTGTTACCAGAGTATCGACCGGTGGCTAGTCCTACCTTTGATGAAGGCCTGCATTCTAATTGCCACAGGAAGATAATGGAAAAACGAAGATGA 492 0.4126 MEVDLDSFDLLELDLRDFVLPGFEEFSVNIPLDLEELGWEYFQCFSDESRICEFEDKTLQQPANKAVNCQNAISGFKRRKGRKKKTKARQNAVLIERKRCSHCKSDDTPQWRLGPNGPKTLCNACGVRFKSGRLLPEYRPVASPTFDEGLHSNCHRKIMEKRR 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi13g0328 163 Pfam GATA zinc finger 100 134 IPR000679 GO:0006355|GO:0043565
Mibi13g0328 163 Gene3D - 95 145 IPR013088 GO:0006355|GO:0008270
Mibi13g0328 163 CDD ZnF_GATA 99 149 IPR000679 GO:0006355|GO:0043565
Mibi13g0328 163 SMART GATA_3 94 144 IPR000679 GO:0006355|GO:0043565
Mibi13g0328 163 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 97 146 - -
Mibi13g0328 163 ProSiteProfiles GATA-type zinc finger domain profile. 94 130 IPR000679 GO:0006355|GO:0043565
Mibi13g0328 163 FunFam GATA transcription factor 14 94 163 - -
Mibi13g0328 163 ProSitePatterns GATA-type zinc finger domain. 100 125 IPR000679 GO:0006355|GO:0043565
Mibi13g0328 163 PANTHER GATA TRANSCRIPTION FACTOR 79 163 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi13g0328 Mibi-ChrMibi13 3280362 3280853 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi13g0328 82 163 C2C2-Gata Transcription Factor Family AT3G24050 64.634 3.98e-34 119
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Mibi13g0328 GATA 5e-17 CL0167