Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi13g0323 ATGGAAGATGAGAGCTACAACAATTTGCCAAATGGGGTCATTTCAGAAAGCCCTCAAGGTACTATCTTAAAGACATCAAATAGCAACAACAAAGAACAAGATCGGTTTCTTCCCATAGCCAATGTGGGAAGAATCATGAAGAAAGTGATGCCTCCAAATGGGAAAATCTCAAAGGATGCAAAAGAGACAGTTCAAGAATGTGTTTCAGAGTTCATCAGCTTTGTCACCGGGGAGGCCTCAGATAAATGCCAAAGAGAGAAGAGGAAGACCATTAATGGGGATGATATCATATGGGCCATCACTACCTTAGGCTTTGACGATTACGTTGACCCTTTGAAATGTTACCTTCAAAAGTATAGAGACTTAGAAGGAGAGAAGCTTAATCTCCCAAAACAACAACGTTCTGAACAAAGGCTTCCCTACCAACACCACCAAAACCAAAACCGATTCCAACCTGATAATAATAATATTATCATTAATAACAATAATTTACCTCTAAGTAGTTTATATTCTTCCACAAATCTCATTTCTCAGCCTCCCTTTGTGCCATCTAGCCAGCCATATAATGCTCTACCTTTCTCCTCGAATTCTGTCAAACAGGACCAGATTGATTCGGTGGGACACTGGTAA 630 0.4 MEDESYNNLPNGVISESPQGTILKTSNSNNKEQDRFLPIANVGRIMKKVMPPNGKISKDAKETVQECVSEFISFVTGEASDKCQREKRKTINGDDIIWAITTLGFDDYVDPLKCYLQKYRDLEGEKLNLPKQQRSEQRLPYQHHQNQNRFQPDNNNIIINNNNLPLSSLYSSTNLISQPPFVPSSQPYNALPFSSNSVKQDQIDSVGHW 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi13g0323 209 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 36 100 IPR003958 -
Mibi13g0323 209 FunFam Nuclear transcription factor Y subunit B-3 25 166 - -
Mibi13g0323 209 SUPERFAMILY Histone-fold 33 144 IPR009072 GO:0046982
Mibi13g0323 209 Gene3D Histone, subunit A 23 157 IPR009072 GO:0046982
Mibi13g0323 209 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 25 152 IPR027113 GO:0001228|GO:0006355|GO:0016602
Mibi13g0323 209 ProSitePatterns NF-YB/HAP3 subunit signature. 67 83 IPR003956 GO:0005634|GO:0006355|GO:0043565
Mibi13g0323 209 MobiDBLite consensus disorder prediction 1 20 - -
Mibi13g0323 209 PRINTS CCAAT-binding transcription factor subunit A signature 102 120 - -
Mibi13g0323 209 PRINTS CCAAT-binding transcription factor subunit A signature 83 101 - -
Mibi13g0323 209 PRINTS CCAAT-binding transcription factor subunit A signature 64 82 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi13g0323 Mibi-ChrMibi13 3224488 3225117 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi13g0323 31 209 CCAAT-HAP3 Transcription Factor Family AT2G13570 62.567 3.61e-67 204
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Mibi13g0323 CBFD_NFYB_HMF 2.5e-27 CL0012