Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi13g0312 ATGAACGAAGCTGAAATGACGATTCCTCACTTGTTCAGATGCCCAATCAGTCTAGACTTGTTTGAAGATCCGGTAACCTTATGCACTGGCCAAACTTATGATAGGTCCAGCATAGAAAGATGGCTTTCTCAAGGTAATCTCACTTGTCCTGTCACAATGCAGAAGCTTCATGATCTCTCCATAGTCCCTAATCACACTCTTCGTCATTTGATTGATCAGTGGCTTCAATTGTATCCTCAATTTGACCACTTTGGTAACTCCAAAACCACAGACTCTCTTGCCTCTCTGAAACTCTCCCTTCAATCTCAGGAATCCACCTTCCAGAACAAACTCCAAGCACTTGAAAACATCAGGCTCTTATCTGATGAGTATTGCTCTTTCCAGAAATCTTGCTTCCTCCAACTGGGTTTCTTGCCTCTTCTTCTGGGACTTGTTTTTGGAGCTCAAATGTCCAAAGAACACCTTCACATGGAGTTCATAGAGCTAGCTCTTTCCTGCATTATAAAGTTGTTACCCCTTGATAATGCCTCAGAGCCTCTAAACATGCTCAAACAAGAACCTAACTTTGAATCGTATCTTGTATTATTCGAAAGGGGAAGTCCCAATATTAAAACAAGTCTGTGTAATCTGATAGATTCAGCAGCATCAGCACATTTGGAAGAGGTATTGCTTATGCTTGGAAATTCCCAGAAACTACTCAATGAAATTGTTCATCTTGTAAGCCAAAATAACTGTGAGGCTTCCAGGGCTGCAGTTAAAGCCATATCAGCTTTATGTTCATTGCAATCAAACAGAGAGAATCTGGTAAAAGCAGGGGCAATAGATGGAATCATGAGGTACATTTCAGGATGTGAAACAAGAGAGAAGAACTTGGCTCCATTGGGGATGCAGATAATAGAGAAGCTTCTGGTAATAGAGAGAGGCAAAGAAGCATTAGTGACCAGTCCAAATGGGATTAAAACTTTGGTGAAGATGGTGTTCAGAGTGAGTAATCATGATTGTAGTGAGAATGCTGTGGGGTTACTGATAATGGTTTGCAGAGAAAGTGGAAGAGCCAGAGAGGAAGCCATTGATGAAGGAGTTCTGACTCAGTTGCTTTTACTTCTGCAGAGTCAATGTAGTGCCAAGACGAAGACGAAGGCAAGAATGCTTCTCAAATTATTAAGATCCAAGTGGGCTGGGAATGTACCAAAACAGGCCTAG 1203 0.4165 MNEAEMTIPHLFRCPISLDLFEDPVTLCTGQTYDRSSIERWLSQGNLTCPVTMQKLHDLSIVPNHTLRHLIDQWLQLYPQFDHFGNSKTTDSLASLKLSLQSQESTFQNKLQALENIRLLSDEYCSFQKSCFLQLGFLPLLLGLVFGAQMSKEHLHMEFIELALSCIIKLLPLDNASEPLNMLKQEPNFESYLVLFERGSPNIKTSLCNLIDSAASAHLEEVLLMLGNSQKLLNEIVHLVSQNNCEASRAAVKAISALCSLQSNRENLVKAGAIDGIMRYISGCETREKNLAPLGMQIIEKLLVIERGKEALVTSPNGIKTLVKMVFRVSNHDCSENAVGLLIMVCRESGRAREEAIDEGVLTQLLLLLQSQCSAKTKTKARMLLKLLRSKWAGNVPKQA 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi13g0312 400 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 7 78 IPR013083 -
Mibi13g0312 400 Pfam U-box domain 8 76 IPR003613 GO:0004842|GO:0016567
Mibi13g0312 400 ProSiteProfiles U-box domain profile. 7 81 IPR003613 GO:0004842|GO:0016567
Mibi13g0312 400 SUPERFAMILY RING/U-box 3 76 - -
Mibi13g0312 400 Gene3D - 85 302 IPR011989 -
Mibi13g0312 400 SMART Ubox_2 11 74 IPR003613 GO:0004842|GO:0016567
Mibi13g0312 400 SUPERFAMILY ARM repeat 109 385 IPR016024 -
Mibi13g0312 400 FunFam RING-type E3 ubiquitin transferase 8 79 - -
Mibi13g0312 400 Gene3D - 303 393 IPR011989 -
Mibi13g0312 400 PANTHER WDSAM1 PROTEIN 5 393 IPR045185 GO:0061630
Mibi13g0312 400 CDD RING-Ubox_PUB 12 54 IPR045210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi13g0312 Mibi-ChrMibi13 3087537 3088739 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi13g0312 8 392 U-box Gene Family AT3G19380 31.343 4.74e-44 156