Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi13g0306 ATGTCCAGAACCAGTGGCAGTGAGAGTAAGAGTTGTAACAGAGGCCATTGGAGACCAGCTGAAGATGAGAGACTGAAACAGCTTGTGGAGCAGTACGGTCCCCAGAATTGGAATTATATTGCAGAACATCTTGATGGGAGATCGGGGAAAAGTTGCAGATTGAGGTGGTACAACCAACTAGACCCAAACATAGTGAAAAGGCCATTCACAGAGGAAGAGGAAGAAATATTGCTAGCTCTTCACAAGGTAAAAGGAAACAAATGGGCTGCAATTTCAAGGTTCTTGCCTGGAAGAACTGATAATTCCGTCAAGAATCACTTCCATGTCCTTATGGCAAGAAGAAAGAGAGAACGTTACACACTCTTTGGTGACACCAGAAGCAGCAATAATAACCACACTAGTCTTAATAACTTCACCTTCCAAAACAACAGAAACTTAGCACTGAATCCTTGGATTAACGCTCGAAGTGATACTTCAACCATTATCTCATCAGATTTAATGAGTTTTGAAGCTTCTGGTGGTTCTGCTAATAATAAGCCCCACATTGATCACTTCATTAATGCTTCAAGTCCTGCTTCTTCTTTTTCTCTGGGAAGCTATAAAAGTTTTACTGCCCCTGGAAATCCCAGTATTGGTAAGGTGGTTCCTCTTCCTCAGAGATCGCCAAAATCTTATTTTGCCCAAAGCACTGATGAGGATTATGCCATGAAAGGCATGACAGACAAGAAAACTCTGGAGGAACATGTTGAAAAGCTTAATAAGGATGTTTCCTTTATAGACTTTCTTGGTGTGGGAAGTTGTTCTGCCAGCGACAGTTGA 819 0.4176 MSRTSGSESKSCNRGHWRPAEDERLKQLVEQYGPQNWNYIAEHLDGRSGKSCRLRWYNQLDPNIVKRPFTEEEEEILLALHKVKGNKWAAISRFLPGRTDNSVKNHFHVLMARRKRERYTLFGDTRSSNNNHTSLNNFTFQNNRNLALNPWINARSDTSTIISSDLMSFEASGGSANNKPHIDHFINASSPASSFSLGSYKSFTAPGNPSIGKVVPLPQRSPKSYFAQSTDEDYAMKGMTDKKTLEEHVEKLNKDVSFIDFLGVGSCSASDS 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi13g0306 272 FunFam MYB transcription factor 14 65 - -
Mibi13g0306 272 Gene3D - 67 143 - -
Mibi13g0306 272 Gene3D - 14 65 - -
Mibi13g0306 272 SUPERFAMILY Homeodomain-like 13 107 IPR009057 -
Mibi13g0306 272 CDD SANT 17 58 IPR001005 -
Mibi13g0306 272 ProSiteProfiles Myb-like domain profile. 61 111 IPR001005 -
Mibi13g0306 272 Pfam Myb-like DNA-binding domain 66 110 IPR001005 -
Mibi13g0306 272 Pfam Myb-like DNA-binding domain 14 60 IPR001005 -
Mibi13g0306 272 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 64 IPR017930 -
Mibi13g0306 272 PANTHER MYB PROTEIN-RELATED 14 152 - -
Mibi13g0306 272 ProSiteProfiles Myb-like domain profile. 9 60 IPR001005 -
Mibi13g0306 272 SMART sant 65 113 IPR001005 -
Mibi13g0306 272 SMART sant 13 62 IPR001005 -
Mibi13g0306 272 CDD SANT 76 111 IPR001005 -
Mibi13g0306 272 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 65 115 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi13g0306 Mibi-ChrMibi13 3046345 3047365 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi13g0306 1 268 MYB Transcription Factor Family AT4G33450 44.948 3.35e-67 207
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mibi13g0306 Myb_DNA-binding 1.5e-15 CL0123