Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi13g0301 ATGCCCGCTTGGTGGGGAAGAAAGTCAAGCAAGAGCAAGGAGGAGCAGCGGCAACAGCAGCAGCTTCCTCATCAGCCTGAATCTCATGGTGGGATTCCGTTCAATTTCATCAAATCGCCCATCAGAAATGGTGTCATCAAGAAAGGGAGAGACAATAAACCTAAGAGTTTTGACGAGGTCTCTACTACTGCTACTGCTACTACTACTGGGATTCTTTCTCGGACTTCGCCTAGAACAAGTAGAGATTTAACTCCTATCTCTGCTCCTCCTGTTGGTGGATCGCCTTCTGGGTTTTCTTGTTTTGATTTTGATGGCGGCGAGAAGATAGGTCACCCTTTACCTCGACCATCGGTTTCGTCGCCCCAGAGCCTTGTGAATGATCAGGGAGATGGAGATGGTTTGGGATCTGCGTCGATCTCTGGTTCAAGCGTCAGTTCTTCTGGGTCTTGTGATCAGCATCAAATCTCTCAATTTGATGCCATCAGGGGACGAAGTGATATGAGGATTTCTATGAGGTGTAAAAGCCCAGGTCCTGGGTCTAGAGGGCCCACCAGCCCGACTTCACCCCTCCATCCAAGACTGCATGCACTAAGTGTTGACTCTCCCACGGGCAAACAAGATGATGGAAGGAGTGAATGTCATCCATTGCCTCTACCACCAGGTTCACCGCCTAGCCCTTCTGCTCTCTCCAATTCAAGAACAAATAGTCTTCCAGAGAACACTACCAACAATCTGTCCAAGTGGAAGAAAGGAAAGCTTTTAGGACGAGGGACATTTGGTCATGTTTACCTGGGATTTAACAGTGAAAGTGGACAAATGTGCGCAATAAAAGAAGTCAGAGTTTTCTCTGATGATCGGACATCGAAAGAGTGCCTCAAACAACTTAGCCAGGAGATAAATCTGCTCAGTTCGTTTTCACATCCTAATATTGTTGAATACTATGGGAGTGAACTGGCAGAAGACACACTTTCTGTTTATTTAGCATACATCTCTGGTGGTTCCATCCATAAACTACTTCAGGAATATGGTGCATTTAAGGAACCTGTTATTCAGAATTATGTTAGGCAGATTGTCTCTGGACTTGCCTATCTGCATGGAAGAAACACAGTGCACCGGGATATCAAGGGGGCAAACATACTAGTTGATCCTAATGGAGAAATAAAGTTGGCAGACTTTGGAATGGCTAAACATATAAATTCTTCTACCTCCATGCTTTCTTTCAAGGGAAGTCCATATTGGATGGCACCAGAGGTTGTTATGAATACAAATGGATACAATCTAGCTGTGGATATATGGAGCTTGGGATGCACAATTCTGGAAATGGCGACATCAAAACCTCCATGGAGTCAGTATGAAGGGGTAGCTGCTATATTTAAAATTGGGAACAGCAAAGATATGCCTGAAATTCCGGAGCATCTTTCAAATGATGCCAAGGCTTTCATACAGCTATGCTTGCAAAGAGATCCATCAGCTCGTCCAACTGCTCAAAGGTTGCTAGAGCATCCTTTTATTCGTGATCAATCTGCAACAAGAGCTGCCAATGTCAGCTTAACCAGAGATGCTTTCCCCTATATGTTTGATGGAAGCCGGACCCCGCCACATGTAGAGCCTCAGTCCAGTAGAACAAATATGACTTCAGTGGATGGAGATCATGCCACAAGGTCTACTTTTGCAGGTTCACGGGCATTAAGGAGCCCAAGAGATAACACAAGAATGATTACATCTTTACCGGTATCACCCTGCTCAAGTCCATTGCGGCAACATGTATCAACATACAAGAGCTGCATGCTTTCTCCTCCACATCCCACTTTCGCCTCTGTGGGACAAAGTACCTACAATTTTAACGATCTCTCTTCATATCCGGTGAGATCAAATGCCACCTTCTCATTAGATCCTTGGAATGAGAGATCTCCATATAATGCCCATACACCTGGCGGGTCCCCAAGAAGGAGACTCATTTGA 1962 0.4526 MPAWWGRKSSKSKEEQRQQQQLPHQPESHGGIPFNFIKSPIRNGVIKKGRDNKPKSFDEVSTTATATTTGILSRTSPRTSRDLTPISAPPVGGSPSGFSCFDFDGGEKIGHPLPRPSVSSPQSLVNDQGDGDGLGSASISGSSVSSSGSCDQHQISQFDAIRGRSDMRISMRCKSPGPGSRGPTSPTSPLHPRLHALSVDSPTGKQDDGRSECHPLPLPPGSPPSPSALSNSRTNSLPENTTNNLSKWKKGKLLGRGTFGHVYLGFNSESGQMCAIKEVRVFSDDRTSKECLKQLSQEINLLSSFSHPNIVEYYGSELAEDTLSVYLAYISGGSIHKLLQEYGAFKEPVIQNYVRQIVSGLAYLHGRNTVHRDIKGANILVDPNGEIKLADFGMAKHINSSTSMLSFKGSPYWMAPEVVMNTNGYNLAVDIWSLGCTILEMATSKPPWSQYEGVAAIFKIGNSKDMPEIPEHLSNDAKAFIQLCLQRDPSARPTAQRLLEHPFIRDQSATRAANVSLTRDAFPYMFDGSRTPPHVEPQSSRTNMTSVDGDHATRSTFAGSRALRSPRDNTRMITSLPVSPCSSPLRQHVSTYKSCMLSPPHPTFASVGQSTYNFNDLSSYPVRSNATFSLDPWNERSPYNAHTPGGSPRRRLI 653
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi13g0301 653 FunFam Mitogen-activated protein kinase kinase kinase 246 528 - -
Mibi13g0301 653 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 80 513 - -
Mibi13g0301 653 Gene3D Transferase(Phosphotransferase) domain 1 245 525 - -
Mibi13g0301 653 MobiDBLite consensus disorder prediction 631 653 - -
Mibi13g0301 653 ProSiteProfiles Protein kinase domain profile. 248 504 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi13g0301 653 MobiDBLite consensus disorder prediction 58 83 - -
Mibi13g0301 653 MobiDBLite consensus disorder prediction 227 245 - -
Mibi13g0301 653 MobiDBLite consensus disorder prediction 533 552 - -
Mibi13g0301 653 MobiDBLite consensus disorder prediction 116 159 - -
Mibi13g0301 653 SUPERFAMILY Protein kinase-like (PK-like) 245 574 IPR011009 -
Mibi13g0301 653 CDD STKc_MEKK1_plant 247 504 - -
Mibi13g0301 653 MobiDBLite consensus disorder prediction 530 552 - -
Mibi13g0301 653 MobiDBLite consensus disorder prediction 1 245 - -
Mibi13g0301 653 Pfam Protein kinase domain 249 504 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi13g0301 653 ProSitePatterns Protein kinases ATP-binding region signature. 254 277 IPR017441 GO:0005524
Mibi13g0301 653 SMART serkin_6 248 504 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi13g0301 Mibi-ChrMibi13 3010497 3016337 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi13g0301 1 567 MAP Kinase Kinase Kinase AT1G53570 55.806 0.0 558
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Mibi13g0301 Pkinase 1.2e-72 CL0016