Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi13g0291 ATGGATATCAACCAAAACCCTACAATGTTCACAAGCGTTAACAACAACAGCACTTCTTCCACCAGTTGGAATCTAGACAACATGGAAATGGATCACAATCTCCATCAACAAATCCTTATGTGTTCTTCTTCTTGGCCTAACTACCTTCAACAACAGGCAATAATACCATCATCATCATCAGGGTTTCTAAACAACGACGACGTGGTTTTGGGGGGAGGAGAAGAAGAAGATGAAGAAGGAAGGGGGATAGAGGAGGAGGAAGAAGAAGAAGAACTTGGAGCAGTGAAGGAGATGATGTACAAGATAGCAGCTATGCAACCGGTAGACATAGACCCGGCCACCATCCGAAAGCCAAAAAGGCGAAACGTGAGGATCAGCGACGACCCTCAAAGCGTGGCGGCGAGGCACCGGCGAGAGAGGATAAGTGAGAAGATCAGAATACTTCAAAGACTTGTCCCTGGTGGCACCAAGATGGACACTGCCTCCATGCTTGATGAAGCCATTCGCTATGTTAAGTTCTTGAAGCGCCAAATTAGGCTCCTCAAATCTCCACCACAATGCATCACTAATAATAACACTACTAATCTTGCCAATAATAATAATATTCACAGTGATCATTATTGGCCTTTTGCACCATCCTCTTCTTTATTACTACATTGTCCAACGGCCACCACCGTCCCCACCACCTCCGGCATGGGCATGCCAGTGAGATTGGGACTCGGCTCAGGATATAATCATGAGTAG 744 0.4597 MDINQNPTMFTSVNNNSTSSTSWNLDNMEMDHNLHQQILMCSSSWPNYLQQQAIIPSSSSGFLNNDDVVLGGGEEEDEEGRGIEEEEEEEELGAVKEMMYKIAAMQPVDIDPATIRKPKRRNVRISDDPQSVAARHRRERISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLKSPPQCITNNNTTNLANNNNIHSDHYWPFAPSSSLLLHCPTATTVPTTSGMGMPVRLGLGSGYNHE 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi13g0291 247 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 130 184 IPR036638 GO:0046983
Mibi13g0291 247 SMART finulus 131 180 IPR011598 GO:0046983
Mibi13g0291 247 Pfam Helix-loop-helix DNA-binding domain 135 174 IPR011598 GO:0046983
Mibi13g0291 247 FunFam BHLH transcription factor 128 192 - -
Mibi13g0291 247 PANTHER TRANSCRIPTION FACTOR HEC3-RELATED 15 209 IPR045843 GO:0003700|GO:0006355
Mibi13g0291 247 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 125 174 IPR011598 GO:0046983
Mibi13g0291 247 MobiDBLite consensus disorder prediction 71 90 - -
Mibi13g0291 247 CDD bHLH_AtIND_like 126 183 - -
Mibi13g0291 247 Gene3D - 128 197 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi13g0291 Mibi-ChrMibi13 2927354 2928097 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi13g0291 92 193 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G09750 87.255 5.93e-47 154
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mibi13g0291 HLH 1.2e-06 No_clan