Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi13g0289 ATGGCCTACTCTGTTCTTCCCACCACCATCATCATCTTCCTCCTCATCTCCGCCGCCTCCTCCGCCGCCACCACCGTCTCCATCCAACACTCGTGCGAAGCCACACGCTTCCCCCAACAATGTCTCTCTTCCTTAACCAAACCCATCAACGGCCTCCCTCCAAATCCCACCTCCTCCCTTCAAATCATCCAATCCGCCATCAACATCTCCACCGACAACCTCAAAACAGCTCAATCCAAAATCAAATCCCTCCTCTCCTCCCTACCCAACTCCCCCGACAATCTTAACAAAACCACAGCCGCCGAGAGCTGCATTTCCATCCTCCACAACTCTGAATATCGAATCTCACAGGTCAACAATGCCTTACCTGTCGGAAAAATTAAGGATGCACGTGCTTGGATGAGTGCTGCATTGGCCTACCAGTTTGATTGCTGGTCGGGATTGAATTATGTTTATGGCAACGACGCCGTTTCGATCAATGACACGTTAAACTTTCTGGACACCCTTACGAGGTATACCAGTAATGCTCTGAGTATGATGGTGTCGTACGATGTTTTTGGTGGTGATACGGCGTCGTGGAAGGTGCCGGTGACGGAGAGGGATGGATTTTGGGAGGTTCCGTCGGGGAAAGTGAGGGGGTTTGGCTATACGGGTGGGTTTCCGTTGGATTTGACGGTGAATGTTACGGTTTGTAAGGGGGCAGAGTGTGATTACCAGACTGTGCAGGGGGCTGTTGATGCGGCTAAAAATAATAGTGAAGGGAGGTTTGTGATTCATATAAGAGAAGGGGTTTATAATGAGACTGTTAGGATTCCGTTGGAGAAGAAAAATGTGATCTTTTTGGGTGATGGAATGACCAGGACCATTATCTCTGGATCTGCTCACGTAGGTCAGCCTGGAATGACCACCTACAATTCAGCCACCGTCGGAGTTCTTGGGGATGGATTCATGGCGGCGAATCTGACAATCCAAAACACAGCAGGATCCGATGCTCATCAAGCAGTGGCATTCAGATCAGACAGCGACCTCTCTATTCTAGAAAACGTCGAATTCATAGGGAATCAAGACACCCTTTACGCACATTCCCTTAGACAATTCTACAAATCATGTAGAATCATTGGGAACGTGGACATGATATTTGGAAACTCAGCTTCATTTTTCCAGCAATGTGCGATTATAATAAGTGAAAGACAAAGCAACACAGAAACAGGAGAGACCAATACAGTAACAGCACATGGGAGATCAGACCCAGCAGAATCCACAGGCTTTGTGTTTTATAACTGTGTGGTGACTGGGACGAAGGAATACATGGAACAGTACAAGAAGAATCCAAAAGTGCATAGGAACTTCTTGGGGAGGCCATGGAAGTTGTATTCAAGAACTGTGTTTGTTCGTTCTGTTTTGGATGCTTTGATATCGCCTGAAGGTTGGTTGCCTTGGGATGGTGATGTGGGTTTGGATACAATATATTATGGGGAGAGTAATAATACAGGTCCAGCTTCTGATAGGAGCAGGAGAGTGGAATGGAGTGAAGAAATTCCACGACGACATCTTTCGGTGTATTCGGTGGATAACTTCATTCAAGGAAGTGATTGGATCCCATCGTATAATCGGCATAGTCGGTAG 1626 0.4711 MAYSVLPTTIIIFLLISAASSAATTVSIQHSCEATRFPQQCLSSLTKPINGLPPNPTSSLQIIQSAINISTDNLKTAQSKIKSLLSSLPNSPDNLNKTTAAESCISILHNSEYRISQVNNALPVGKIKDARAWMSAALAYQFDCWSGLNYVYGNDAVSINDTLNFLDTLTRYTSNALSMMVSYDVFGGDTASWKVPVTERDGFWEVPSGKVRGFGYTGGFPLDLTVNVTVCKGAECDYQTVQGAVDAAKNNSEGRFVIHIREGVYNETVRIPLEKKNVIFLGDGMTRTIISGSAHVGQPGMTTYNSATVGVLGDGFMAANLTIQNTAGSDAHQAVAFRSDSDLSILENVEFIGNQDTLYAHSLRQFYKSCRIIGNVDMIFGNSASFFQQCAIIISERQSNTETGETNTVTAHGRSDPAESTGFVFYNCVVTGTKEYMEQYKKNPKVHRNFLGRPWKLYSRTVFVRSVLDALISPEGWLPWDGDVGLDTIYYGESNNTGPASDRSRRVEWSEEIPRRHLSVYSVDNFIQGSDWIPSYNRHSR 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi13g0289 541 TIGRFAM PME_inhib: pectinesterase inhibitor domain 8 165 IPR006501 GO:0004857
Mibi13g0289 541 CDD PMEI-like_3 31 180 - -
Mibi13g0289 541 SUPERFAMILY Pectin lyase-like 226 536 IPR011050 -
Mibi13g0289 541 FunFam Pectinesterase 4 224 539 - -
Mibi13g0289 541 Gene3D - 222 539 IPR012334 -
Mibi13g0289 541 SMART PMEI_2 23 179 IPR006501 GO:0004857
Mibi13g0289 541 Pfam Plant invertase/pectin methylesterase inhibitor 27 179 IPR006501 GO:0004857
Mibi13g0289 541 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 28 179 IPR035513 -
Mibi13g0289 541 PANTHER PECTINESTERASE 15 534 - -
Mibi13g0289 541 Pfam Pectinesterase 227 529 IPR000070 GO:0030599|GO:0042545
Mibi13g0289 541 Gene3D Invertase/pectin methylesterase inhibitor family protein 22 182 IPR035513 -
Mibi13g0289 541 FunFam Probable pectinesterase/pectinesterase inhibitor 51 26 182 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi13g0289 Mibi-ChrMibi13 2872004 2875583 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi13g0289 21 532 Carbohydrate Esterase AT5G09760 61.122 0.0 643