Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi13g0283 ATGGTGAGAGATGATGATCTCTGCGTCACAATCCCTAGCTTCTTCCGATGCCCAATTTCCCTCGACCTCATGAAATCCCCTGTCATCCTCTCCACCGGCGTCACCTACGACCGTTCCAGCATCCAACGCTGGCTCGACGACGGCAACAACACCTGCCCAGCCACCATGCAGGTTCTTCAATCCAAAGAATTCGTCCCTAACCGCACTCTCCAAAGGCTCATCCACATCTGGACCCATTCCGTACGACGCCGTTTCGATTCTTCTTCCAATTCCGTCCCCTCGCGAGACCACGTTGTTGATGCCATCCGAGATTTGGAGGGAAATTGTGTGAATCGTTTGAACTCGCTCGCTGGAATTTTGTCCTTTGCTGGAGAATCGGAGGAAAATCGGGAGTTCTTGGTGAATTTTCAGGGTTTCGTGGATTTGCTCGTTGGTTTTCTTGACAATGTCGATCGTGGAATTGAATTCCTTGAGAATGTTGTCAAGGTTTTGGAATTGTTAGTGAGTAAAGTGAAAGACGATGAGAAATTGAAGCGTTCGATTGTGAATAATTGTTTGGCTTCTCTGCTTCTTGTTCTTCAACGAGGAAGCTCAGATTCGAAAATTGCTACGGCTAAGATTTTGAAATTCGCTGCTACTGACGTCGAATCGAAGATCCTGATCGCCGAAAACGAAGGCCTAATTCACGAATTGCTTAAAATGATGACATCAAGCAAAGATGAGATGCAAATCGAGAACGGCTTATCATGTTTGGTGGAAATCTCAACGCCGAAACGAAACAAAGCGAAATTGATCAATCTTGGAGCTGTGAAGAAACTATCAGAGATACTCTCAGAATCGAAATTGAGCGTTTCAATCACGGAGAATTCACTGAAGCTTCTAGAAGCAATGTCGACGATCAAGGAAGGAAGGTTCCAGATCTGTGAGGATACAAATTGTGTGTCGTTGATATTGAATAAGGTCATGAAAGTATCAAAGGTTGCAACGGAATATGCAGTGACTATACTTTGGAGCTTGTGTTATCTATTTCGTGATCAGAAGGCGCAAGAATCGGTGACGAAGGCCAATGGTTTGACCAAGATTTTGCTTCTGATGCAGATGAATTGTTCGCCTGGAGTTCGTAGAATGTGCGTTGATTTGCTCAAGATTTTCAGGGTTAATTCTAAGTCATGCCTATCTTGTTATCATACCAAGACCACACATATCATGCCCTTTTGA 1218 0.4442 MVRDDDLCVTIPSFFRCPISLDLMKSPVILSTGVTYDRSSIQRWLDDGNNTCPATMQVLQSKEFVPNRTLQRLIHIWTHSVRRRFDSSSNSVPSRDHVVDAIRDLEGNCVNRLNSLAGILSFAGESEENREFLVNFQGFVDLLVGFLDNVDRGIEFLENVVKVLELLVSKVKDDEKLKRSIVNNCLASLLLVLQRGSSDSKIATAKILKFAATDVESKILIAENEGLIHELLKMMTSSKDEMQIENGLSCLVEISTPKRNKAKLINLGAVKKLSEILSESKLSVSITENSLKLLEAMSTIKEGRFQICEDTNCVSLILNKVMKVSKVATEYAVTILWSLCYLFRDQKAQESVTKANGLTKILLLMQMNCSPGVRRMCVDLLKIFRVNSKSCLSCYHTKTTHIMPF 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi13g0283 405 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 4 87 IPR013083 -
Mibi13g0283 405 SUPERFAMILY ARM repeat 108 387 IPR016024 -
Mibi13g0283 405 ProSiteProfiles U-box domain profile. 10 84 IPR003613 GO:0004842|GO:0016567
Mibi13g0283 405 Gene3D - 88 400 IPR011989 -
Mibi13g0283 405 Pfam U-box domain 11 80 IPR003613 GO:0004842|GO:0016567
Mibi13g0283 405 CDD RING-Ubox_PUB 15 57 IPR045210 -
Mibi13g0283 405 PANTHER WDSAM1 PROTEIN 10 393 IPR045185 GO:0061630
Mibi13g0283 405 Coils Coil 154 174 - -
Mibi13g0283 405 FunFam RING-type E3 ubiquitin transferase 3 83 - -
Mibi13g0283 405 SMART Ubox_2 14 77 IPR003613 GO:0004842|GO:0016567
Mibi13g0283 405 SUPERFAMILY RING/U-box 6 80 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi13g0283 Mibi-ChrMibi13 2819404 2820621 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi13g0283 2 405 U-box Gene Family AT5G09800 52.415 1.24e-137 397