Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi13g0280 ATGGAATCCAAAGCCAAAAACTTTATTAGGGTAGGAGACTATATTCTGAAGATGAAGATCAAAGAAGGTTCTTTCTCCACCGTGTGGAAAGCTGAACACATATTCAACGGCGATGAAGTGGTTGTGAAACAAGTTTGCCTCTCCAGACTCAATCGCCGCCTCAAGTCCAGCTTTGACTGCGAAATCAATTTTCTATCCTCCGTCAACCACCCTCATATAATTCGCCTTCTTGACATCTTCCAGGAAGATGGATGTGTATACCTGGTCCTGGAGTTTTGTGCTGGAGGAAATTTGGCTGCTTACATTCAGCTCCATGGGAGAGTTCAGCAACAAATTGCTAGAAAATTCATGCAGCATCTTGGATCTGCTTTGGAAATATTGCACTCTCGTGGCTTCATTCACAGGGACCTGAAGCCTGAGAACATTTTGTTATCAAGCCAAGGGGATGATTCAGTGCTTAAGATTGCTGATTTTGGTCTATCAAGAACATTGCGTCCAGGTGAATATGCCGATACTGTTTGTGGGTCTCCATTATACATGGCTCCTGAAGTTCTTCAATTCCAGAAATATGATGATAAGGCAGATATGTGGAGTGTTGGTGCCATTCTTTTTGAGCTTTTAAATGGCTTTCCACCCTTCAATGGAAGAAATAATGTACAGCTGTTGAAGAATATCAGATCCTGCACATGCCTTCCATTTTCCCAGCGAATCCTTTCAGCAGTAGATCCTGACTGTCTTGATATGTGTTCTAGACTACTGTGCTTAAATCCAGAGGAGCGTCTATCTTTTGATGAATTTTATGGGCATAGGTTTCTAAGACAACTAGATAAGTCATGGGGTCTTAGCAGCAATCCAAGAATTGAAGGGATTTATGCGCAGAAGAGTAAGTAG 891 0.4209 MESKAKNFIRVGDYILKMKIKEGSFSTVWKAEHIFNGDEVVVKQVCLSRLNRRLKSSFDCEINFLSSVNHPHIIRLLDIFQEDGCVYLVLEFCAGGNLAAYIQLHGRVQQQIARKFMQHLGSALEILHSRGFIHRDLKPENILLSSQGDDSVLKIADFGLSRTLRPGEYADTVCGSPLYMAPEVLQFQKYDDKADMWSVGAILFELLNGFPPFNGRNNVQLLKNIRSCTCLPFSQRILSAVDPDCLDMCSRLLCLNPEERLSFDEFYGHRFLRQLDKSWGLSSNPRIEGIYAQKSK 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi13g0280 296 SMART serkin_6 14 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi13g0280 296 Pfam Protein kinase domain 16 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi13g0280 296 FunFam Maternal embryonic leucine zipper kinase 7 287 - -
Mibi13g0280 296 PANTHER SERINE/THREONINE-PROTEIN KINASE UNC-51-RELATED 10 274 IPR045269 GO:0004674|GO:0006914
Mibi13g0280 296 Gene3D Transferase(Phosphotransferase) domain 1 6 292 - -
Mibi13g0280 296 SUPERFAMILY Protein kinase-like (PK-like) 7 279 IPR011009 -
Mibi13g0280 296 ProSitePatterns Serine/Threonine protein kinases active-site signature. 132 144 IPR008271 GO:0004672|GO:0006468
Mibi13g0280 296 ProSiteProfiles Protein kinase domain profile. 14 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi13g0280 Mibi-ChrMibi13 2794816 2796721 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi13g0280 6 274 Miscellaneous Gene Families AT1G29230 35.401 7.72e-48 165
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Group-Pl-3 Mibi13g0280 Pkinase 1.3e-67 CL0016