Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi13g0266 ATGGATTCGGACGATTTCCGATCTATATTGGAAACAGCTGGCGTTGACGTTTGGACTTTCATCGACACCGCAATCACCGTCGCTTCTTTGGATTACGGCAACGACTTGAAGTATCGCCGCGACGGAATCGTTGAGCGACTCTATGCGGCTACTTCTTCTTCTTCTCCTGCGTCTTGCCGGAATTGCGAGCCCAATCATGTGCTGTCTAACGGCCGTACAATCGGAGCTCCGATCAAGAAGCATAGCAGTCCTGTGACGCCGCAATCTTTGGGAAAAGATGAGAACGAAGACGAAGAGGCGGAGGAGGAGATAGATCCTTATGGAGGTTTGTTTGATGATGAGCAGAAGAAGATTCTGGAGATTAAAGAGATGCTTGAAGACCCTAACCAGTCTGAAGAATCATTGGTGGATTTGCTACAAAGTCTTGCAGATATGGATATCACATTCCAAGGGCTAAAGGATACTGACATTGGGAGGCATGTGAATCGTTTTCGGAAGCATTCGTCCAACGATGTTCGGAGATTGGTGAAGTTACTTGTCAGGAAATGGAAAGATATTGTGGATGAGTGGGTGAAGTTGAATCCCCCGGCAGAGAACACGTCACTAATGGCTGATGGGGAATCGCCTCCGCTCAAAACCACAGCCCAAAACGGCTATCACCAGATTCCTGATTTTGCTTACTCGCCAAATCCACATAATGGTAGTTCTGGTTCGGACCGGAACAATTCAGAGGCAGAACTAAAACCAAAACCAAAACCAATTCCACGGAAAGAAGCTCCGCCAAAACCATCGCCATCTGTTTCTATATCTGCCTCTGCTCCGCCTCAAAACAGACAGAGAGAACAAAGGGAAAGCAATTTTGACGCCGAGAGACTTGCTTCGGCAAGAAGGCGGCTTCAAGAGAACTACAAGGAAGCCGAAAATGCCAAAAAGCAGAGAACCATTCAGGTGATGGACATCCATGAGCTGCCAAAACCAAAAGCCAAGAACGCCTTCTTTGCCAAGAACAGAGGCGGCGGCGGCGGCGGCTCTCAGGGAAGGCATTGGTGA 1050 0.4848 MDSDDFRSILETAGVDVWTFIDTAITVASLDYGNDLKYRRDGIVERLYAATSSSSPASCRNCEPNHVLSNGRTIGAPIKKHSSPVTPQSLGKDENEDEEAEEEIDPYGGLFDDEQKKILEIKEMLEDPNQSEESLVDLLQSLADMDITFQGLKDTDIGRHVNRFRKHSSNDVRRLVKLLVRKWKDIVDEWVKLNPPAENTSLMADGESPPLKTTAQNGYHQIPDFAYSPNPHNGSSGSDRNNSEAELKPKPKPIPRKEAPPKPSPSVSISASAPPQNRQREQRESNFDAERLASARRRLQENYKEAENAKKQRTIQVMDIHELPKPKAKNAFFAKNRGGGGGGSQGRHW 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi13g0266 349 SMART TFS2_5 118 189 IPR003617 GO:0005634
Mibi13g0266 349 Gene3D Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 112 201 IPR035441 -
Mibi13g0266 349 SUPERFAMILY Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 115 199 IPR035441 -
Mibi13g0266 349 MobiDBLite consensus disorder prediction 197 295 - -
Mibi13g0266 349 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 26C-RELATED 1 349 IPR044790 -
Mibi13g0266 349 Coils Coil 289 316 - -
Mibi13g0266 349 MobiDBLite consensus disorder prediction 326 349 - -
Mibi13g0266 349 ProSiteProfiles TFIIS N-terminal domain profile. 113 190 IPR017923 -
Mibi13g0266 349 MobiDBLite consensus disorder prediction 265 280 - -
Mibi13g0266 349 MobiDBLite consensus disorder prediction 243 257 - -
Mibi13g0266 349 MobiDBLite consensus disorder prediction 206 242 - -
Mibi13g0266 349 CDD TFIIS_I 115 188 - -
Mibi13g0266 349 Pfam TFIIS helical bundle-like domain 138 187 IPR017923 -
Mibi13g0266 349 MobiDBLite consensus disorder prediction 281 295 - -
Mibi13g0266 349 MobiDBLite consensus disorder prediction 73 103 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi13g0266 Mibi-ChrMibi13 2677292 2679341 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR IWS1 Mibi13g0266 Med26 3.9e-10 No_clan