Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi13g0254 ATGTCTAAGGTGGCGAATCTGAGAGACAAGGCAAAGGAAGAAGAAGGTGAACAAAGAAGCAAGCCTGTGACGTCATCTATGCCGATGGTATTTCCAGATATAGATAGGGAGAGGGAGATGTCTGCCATGGTTTCAGCTTTGACCCAAGTTGTGTCGGGAGAAGTGCCATCAGATTATATGGCTTCTCATCAATATGAATATCCAACATACCTAAATACAGTCGAAGCTTCTGCCACACCATCTTCGTCTTCTTCATTTTATGTTGCTAGTTCTGCTGTAACAACAAGTATGGAAGGTGGCACATTCTCACAGAGAGCCTCATCCTCATCCCCTGTTTTCCCAACAAATAGAGAAGGGAGGAACGGAAGGAACGAAATGATGGAAATGGGAAATGCAGTGTATGAATACAAGGCAGAGAACAGGAGGGAGCAGGGGAGAAGAAAATACAGAGGAGTGAGACAGAGGCCATGGGGGAAATGGGCTGCAGAAATAAGAGATCCATTTAAAGCAGCAAGGGTATGGTTAGGCACATTTGACACAGCAGAAGACGCAGCTAGAGCATACGACGAAGCTGCCTTGAGTTTTAGAGGCAGTAAGGCTAAGCTTAATTTCCCTGAAAATGTCACTCTTCGTTCTCCTCCCCAAAATCTTCAAAACTTGCAGAATGATCACATGGTTTCATCACATCTTCAACCATCCCCAATGGCATCCCTAATGCCACCTCCTGCATCTACACTTCCTATGCTTTATCCTACACAGGCTCAGATGAGTGATTCTGAGTATTTTGTACCTTCATCGTTTACATCTGCCGGTTACAACTTTTATTATCAATGA 834 0.4424 MSKVANLRDKAKEEEGEQRSKPVTSSMPMVFPDIDREREMSAMVSALTQVVSGEVPSDYMASHQYEYPTYLNTVEASATPSSSSSFYVASSAVTTSMEGGTFSQRASSSSPVFPTNREGRNGRNEMMEMGNAVYEYKAENRREQGRRKYRGVRQRPWGKWAAEIRDPFKAARVWLGTFDTAEDAARAYDEAALSFRGSKAKLNFPENVTLRSPPQNLQNLQNDHMVSSHLQPSPMASLMPPPASTLPMLYPTQAQMSDSEYFVPSSFTSAGYNFYYQ 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi13g0254 277 MobiDBLite consensus disorder prediction 1 30 - -
Mibi13g0254 277 SMART rav1_2 148 211 IPR001471 GO:0003700|GO:0006355
Mibi13g0254 277 PRINTS Ethylene responsive element binding protein signature 171 187 IPR001471 GO:0003700|GO:0006355
Mibi13g0254 277 PRINTS Ethylene responsive element binding protein signature 149 160 IPR001471 GO:0003700|GO:0006355
Mibi13g0254 277 Pfam AP2 domain 148 197 IPR001471 GO:0003700|GO:0006355
Mibi13g0254 277 MobiDBLite consensus disorder prediction 101 123 - -
Mibi13g0254 277 MobiDBLite consensus disorder prediction 1 20 - -
Mibi13g0254 277 PANTHER DNA-BINDING DOMAIN 94 227 IPR044808 GO:0003700|GO:0009873
Mibi13g0254 277 FunFam Ethylene-responsive transcription factor 2 147 206 - -
Mibi13g0254 277 SUPERFAMILY DNA-binding domain 148 206 IPR016177 GO:0003677
Mibi13g0254 277 Gene3D AP2/ERF domain 147 207 IPR036955 GO:0003700|GO:0006355
Mibi13g0254 277 ProSiteProfiles AP2/ERF domain profile. 148 205 IPR001471 GO:0003700|GO:0006355
Mibi13g0254 277 MobiDBLite consensus disorder prediction 101 117 - -
Mibi13g0254 277 CDD AP2 148 207 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi13g0254 Mibi-ChrMibi13 2584859 2585949 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi13g0254 138 212 AP2-EREBP Transcription Factor Family AT5G61890 76.923 2.41e-34 123
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mibi13g0254 AP2 1.7e-15 CL0081