Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi13g0251 ATGGGTTGCGTCAACACCAAGCTTTCTCCCTCTCGCAACGAGAAGTGGAAAAACGACCATGGCTATGGTAGTCAAAGCAGATCATCCATACAGACAAGTCGCAGCTATAATAATCAGAGGCCACTTTCGGATAACAAGTTACAGCAAAGGATTTCAACTTCAAGAACAGCAGAGAATAATGGTGGTGATGGTAGGGTCAGAGAAGAAGAGAGAGGAGAAAGGGTGGTTTCTGGAGTAGAGAAGCATGAGGTTGGCAATGTTTCAAAGAGATTTGTGGATAAGAAGATTGGAAAAGATGTGTATGTGGGTGCTTGGCCTAAGTGGTTGGTTGATAATATACCTGCACATGTTCTGTCTGTCCTGATTCCCAAGAGTGCTGATTGTTATGAAAAGCTTGCCAAGATAGGACGTGGAACATATAGCAACGTGTACAAAGCCAGAGAAAAGGCATCTGGAAAGATTTTTGCCATGAAGAAGGTCCGGTTTGACACATCAGATTCAGAAAGTATAATGTTCATGGCCAGAGAAATCATGATTCTGCAAAAGCTTGACCATCCCAACGTCATCAAACTTGAAGGCATAGCCACCTCAAGGATGCAATATAGTCTCTACCTAGTCTTTGATTACATGCAATCCGATCTTACCCGAGTCATCACCCGCCCCGGTGAAAAACTCACTGAACCACAGATTAAGTGTTATATGCAGCAACTGCTTTCTGGGCTGCAGCATTGCCATGAGAGAGGAGTGATGCACAGAGACATAAAAGCTTCAAACTTGTTAATAGACAAGAAAGGAGTACTGAAAGTTGCAGATTTTGGGCTGGCAAATTCCTTTGATCTTAAACCAAAAGGCCCTTTCACCAATAGAGTGGTGACACTCTGGTATAGAGCTCCTGAATTACTTTTGGGTTCTACTGATTATGGATTCGCCATTGATCTCTGGAGTGCTGGATGCCTCTTGGCTGAAATGTTCTACGGAAAGCCCATTATGCCTGGCAGGACTGAGGTTGAACAATTGCACATGATCTTCAAACTATGTGGTTCTCCAACTGAGGATTACTGGAAGAAATTGAAGCTAATGACAAGTTATAGGCCACCTAATTACAAGCCTAATTATGATGAAGCCTTCAAGGATTTTCCTCCCTCTTGTATTGGCCTCTTAACCATGCTTCTTGATCTTGATCCTAACTATCGCGGCAGTGCTGCCTCTGCTCTCGAATCAGAATTCTTCAAGACCAGCCCTTTCGCATGTCCTCGTTCAGCTCTGCCAGTAGTATACAAAGACGATGATGAGCGGTCACATATCAAAAGACGCAAAAAGCATAGGACATCCAAGAAAGGACAAATACGCCAGCCAAGTAACGTAACTCAGCCAGGAAAGGACAAAATTGCCGCCGGACAAGTCCTGAGAAATTCAGAATCGTCAAAAGAGGAGAAGAACGTGGAAGGAATTAGCATGTCTGGGTTAGAAACGGGGTATAGTATAAGCAGCACATCATCTAACTCAAAACAATATACAACAGAAGGGAGCTTGAACACATCACTGACTCTGTCTCCAGTTTTTCTGTCAATTGGTGAGAAAAGATCTCCCAGAACTGAAGCACATCCAAACGCTCTCAAGAACGTCAAGAACTATAGCATAAGCTATTTGCAGGCCATGATGAATGGAAAAGAGGGTAATGATTCAGCTCAATTTCGCCGATCCTTTTCTGTTGTGGAATCTCGGTTTGATCCTGATAAGTTATCTAATATCCTTGAATTAAATAAGAGGTTAAGCAATCGAAAGTGA 1788 0.4295 MGCVNTKLSPSRNEKWKNDHGYGSQSRSSIQTSRSYNNQRPLSDNKLQQRISTSRTAENNGGDGRVREEERGERVVSGVEKHEVGNVSKRFVDKKIGKDVYVGAWPKWLVDNIPAHVLSVLIPKSADCYEKLAKIGRGTYSNVYKAREKASGKIFAMKKVRFDTSDSESIMFMAREIMILQKLDHPNVIKLEGIATSRMQYSLYLVFDYMQSDLTRVITRPGEKLTEPQIKCYMQQLLSGLQHCHERGVMHRDIKASNLLIDKKGVLKVADFGLANSFDLKPKGPFTNRVVTLWYRAPELLLGSTDYGFAIDLWSAGCLLAEMFYGKPIMPGRTEVEQLHMIFKLCGSPTEDYWKKLKLMTSYRPPNYKPNYDEAFKDFPPSCIGLLTMLLDLDPNYRGSAASALESEFFKTSPFACPRSALPVVYKDDDERSHIKRRKKHRTSKKGQIRQPSNVTQPGKDKIAAGQVLRNSESSKEEKNVEGISMSGLETGYSISSTSSNSKQYTTEGSLNTSLTLSPVFLSIGEKRSPRTEAHPNALKNVKNYSISYLQAMMNGKEGNDSAQFRRSFSVVESRFDPDKLSNILELNKRLSNRK 595
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi13g0251 595 ProSiteProfiles Protein kinase domain profile. 129 410 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi13g0251 595 FunFam probable serine/threonine-protein kinase At1g54610 116 211 - -
Mibi13g0251 595 MobiDBLite consensus disorder prediction 22 60 - -
Mibi13g0251 595 SUPERFAMILY Protein kinase-like (PK-like) 123 415 IPR011009 -
Mibi13g0251 595 MobiDBLite consensus disorder prediction 61 79 - -
Mibi13g0251 595 Gene3D Phosphorylase Kinase; domain 1 119 211 - -
Mibi13g0251 595 Gene3D Transferase(Phosphotransferase) domain 1 212 451 - -
Mibi13g0251 595 PANTHER CELL DIVISION PROTEIN KINASE 127 414 - -
Mibi13g0251 595 MobiDBLite consensus disorder prediction 428 485 - -
Mibi13g0251 595 Pfam Protein kinase domain 129 410 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi13g0251 595 MobiDBLite consensus disorder prediction 1 79 - -
Mibi13g0251 595 ProSitePatterns Protein kinases ATP-binding region signature. 135 158 IPR017441 GO:0005524
Mibi13g0251 595 ProSitePatterns Serine/Threonine protein kinases active-site signature. 249 261 IPR008271 GO:0004672|GO:0006468
Mibi13g0251 595 SMART serkin_6 129 410 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi13g0251 595 FunFam Putative serine/threonine-protein kinase 212 448 - -
Mibi13g0251 595 CDD STKc_CDK9_like 129 410 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi13g0251 Mibi-ChrMibi13 2543308 2547073 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi13g0251 124 451 Core Cell Cycle Gene Families AT5G10270 46.839 1.12e-100 313
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Mibi13g0251 Pkinase 3.6e-70 CL0016