Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi13g0247 ATGAAGAAACCTCGCTCTTTCTTCCTCCTCCTCCTCTTCTTCTTCTTCACTCTTGCTTCTTCCTCCTTCACAGACCAAACCCACCAGCTTCTCTCCTTCAAGAACTCCCTCCCTAACCCCTCCCTCCTCCACAACTGGCTCCCTAATCGTGACCCCTGCTCCTTCATTTCCATTTCCTGCCATGAAAATCTCATTTCCTCCATAGACCTCTCCCAAATCCCCTTAAACACCAACTTCACCCTCGTCTCCACCTTCCTCCTCTCCCTCAACCACCTTCAATCTCTCACTCTTCACTCCACAAACCTCTCCGGCTCCATTTCCTTCCCTCCTACTTCCACCTGTAGCACCTCATTGAACTCCATAGATCTATCTCAGAACACTTTATCTGGCCCCCTTACTTCCTTGAACTTCTTCTCCTCTTGTTCCTCCCTGAAATCTCTCAATCTTTCATCCAATTTGTTGGAATTTTCAGGGAGAGACTCAACAGGTTTGAGGCTGCTAAACCTTCAGGTCCTCGATCTCTCTTACAATAACAAGATTTCTGGTCCCTACGTTCTCCCATGGATCTTTTCACAGGGTTGTGGTGACATTCAGGTGTTGTCTCTTAAAGGAAACAGAATCACAGGGGAAATTAACTCCTTCTCTACTTGCAAATCTTTGCACCATCTTGACATTTCCTCTAACAATTTCTCTCTCGCTCTTCCTTCTTTTGGTGATTGCCTTGCTCTGGAGCACCTTGACATCTCTGCTAATAAGTTTTACGGTGACATTTCTCGGTCTCTCTCCGGTTGCAAAAATCTCAGTTACTTGAATATCTCCGGCAACGACTTCTCCGGTCCGGTTCCCTCACTTCCGTCCGGTTCTCTACAGTTCTTGTACCTCGCCAACAACCATTTCCAAGGAGAGATTCCTTCTGGGATTTCTGACTTGTGCCTCACTTTGGTGGTACTCGATCTTTCCTTTAACAACCTTTCCGGTGTGCTTCCGAGTGATTTCAAGGCTTGTTCTTCGTTGGAATCTTTTGATATATCACACAACAAGTTCACCGGCGAACTTCCGGTTGATTTTTTCGCTGAATTGAGTGGATTGAAGAGGTTAGTTCTTTCCTTTAATTACTTCACTGGTACTCTGCCTCGTACAATTTCTCAGTTCTCGAGGTTGGAGACGTTGGATCTGAGTGCTAATAATCTCACTGGTCCAATTCCTGGAGGGCTGTGTGAAGATCCGAGGAATAATTTGAAGGAATTATACCTTCAGAATAATTTGTTGACAGGTTATATTCCACCTACACTTAGTAACTGTTCTGAGCTTGTGACTTTGGATTTGAGTTTCAACTACTTGATGGGGACTATCCCTTCTAGCTTTGGGTCTCTTTTAAAGCTCAAGGATTTGATTCTTTGGCTGAACCAGCTCCATGGAGAAATACCACAAGAGCTTCAGCAGATTAAGACTCTTGAGAATTTGATTCTGGACTTCAATGAGCTGTCTGGGACTATCCCTTCTGGTTTAAGCAACTGCACCAGCTTGAATTGGTTGTCCTTGTCTAATAACAGGTTGAGTGGGGAGATTCCGGCTTGGATTGGTCAGCTTTCAAATCTTGCGATCTTGAAGTTGAGTAATAACTCATTCTCTGGGAGGATTCCGCTTGAGCTTGGGGATTGTGAAAAGTTGATATGGTTGGATCTGAATACTAATTCTCTGAATGGATCAATTCCTCCTGAGTTGTTTAAGCAGTCGGGCAAAATTGAGGTTAATTTCATCAGTCGGAAGTCATATGTGTATATCAAGACGGATGGTAGTAAGCAGTGCCATGGAGCAGGGAATTTGCTGGAGTTTGCTGGTATTAATATGGAGCAGATGAGCAGGATTTCTGCCAGGAGCCCTTGCAGTTTCACTAGCTTCACTAGAGTTTATAATGGTAAGGTCCGTCCCAAGTTTAGTCAAGGTTCTATGATTTTTCTGGACATTTCACACAATAGGTTGTCGGGTGCTCTTCCCAAGGAGATGGGGAGTATGAACACTCTGTTAATTTTGAACTTGGGTTACAATGATTTATCTGGGAACATCCCACCGGAATTTGGAGACATGAAAAATCTCAACATTCTTGATCTCTCCAACAATAGGCTTGAAGGACAGATTCCTCAATCCTTGACAGGCATTTCCATGCTCACGGAAATTGACCTGTCAAGCAACAATCTCTCAGGGTTGATTCCTGAATCCGGTCAGTTCGATACGTTTCCCGCTGCCAAGTTTGCAAATAATTCTGGTCTTTGCGGCGTCCCTCTTGCTTCCTGTGGATCGGACTCCAGAGCAATTGCAAATGCCAGGCATCAGAGGTCGAACCAAAGGCGAGCATCTCTGGCAAGGAGTGTGTCCATTGGGTTGCTGTTCGCCCTATTTTGCATACTTGGTCTAATCATAATCGCCTTCGAGGCAAGAAAGAGGAGGAAGAAGAAGGAGGCCGCCTTGGATGTCTACATAGACAGTCGGTCTCACTCAGGTACGGCTAATGCTGGTTGGAGGGTGAGTGCCCGCGAAGCTCTTAGCATAAATCTTGCAACTTTCGAGAAGCCCCTTAGGAAGCTTACTTTTGGGGACCTTGTTGAAGCCACAAATGGCTTCCACAATGACAGTCTTATTGGTAAAGGTGGTTTTGGAGATGTATACAAGGCTCAGTTGAAAGATGGGAGTGTAGTGGCCATTAAGAAACTGATTCATATTAGTGGACAAGGGGACAGGGAGTTCACTGCTGAAATGGAAACCATCGGGAAAATTAAGCACAGGAACCTTGTTCCCCTTCTTGGATACTGCAAAGTTGGAGAAGAAAGACTCTTGGTTTATGAATACATGAAATATGGAAGCCTAGAGGATGTTTTGCATGATCCGAAGAAATCTGGGATGAAGCTGAACTGGGCAGCCAGGAGGAAGATTGCAATTGGAGCTGCCAGGGGATTGGCTTTTCTTCACCACAATTGCATTCCTCACATCATTCACAGGGACATGAAATCAAGCAATGTGTTGCTTGATGGGAATCTGGAAGCCAGAGTCTCCGATTTTGGAATGGCAAGGCTTATGAGTGCCATGGACACCCATTTAAGTGTCAGCACACTAGCAGGCACCCCAGGTTATGTTCCTCCTGAATATTACCAGAGCTTTAGATGTTCCACGAAAGGTGATGTTTATAGTTATGGTGTAGTTCTGTTGGAGCTACTGACAGGGAAAAGACCCACAGATTCATCAGACTTTGGAGATAACAATCTGGTGGGATGGGTTAAGCAGCATGCTTTATTATTAAGGGATGTTTTTGACCCAGAGCTCATGAAAGAGGATCCGAGTCTTGAGATTGAGCTTTTACAACACTTGAGAGTTGCTTGTGCTTGTCTTGATGATCGACCAATGCGCCGTCCCACGATGATTCAAGTGATGGCAATGTTCAAGGAAATCCAAGCAGGATCTGGGATGGATTCCCAGTCTACCATCACGAGTGAGGATGGTGGTTTTGGCGCCATGGAAATGGTAGATATGAGCATAAAAGAAATCCCTGAATTAACCAGCAAGCAGTAG 3564 0.4498 MKKPRSFFLLLLFFFFTLASSSFTDQTHQLLSFKNSLPNPSLLHNWLPNRDPCSFISISCHENLISSIDLSQIPLNTNFTLVSTFLLSLNHLQSLTLHSTNLSGSISFPPTSTCSTSLNSIDLSQNTLSGPLTSLNFFSSCSSLKSLNLSSNLLEFSGRDSTGLRLLNLQVLDLSYNNKISGPYVLPWIFSQGCGDIQVLSLKGNRITGEINSFSTCKSLHHLDISSNNFSLALPSFGDCLALEHLDISANKFYGDISRSLSGCKNLSYLNISGNDFSGPVPSLPSGSLQFLYLANNHFQGEIPSGISDLCLTLVVLDLSFNNLSGVLPSDFKACSSLESFDISHNKFTGELPVDFFAELSGLKRLVLSFNYFTGTLPRTISQFSRLETLDLSANNLTGPIPGGLCEDPRNNLKELYLQNNLLTGYIPPTLSNCSELVTLDLSFNYLMGTIPSSFGSLLKLKDLILWLNQLHGEIPQELQQIKTLENLILDFNELSGTIPSGLSNCTSLNWLSLSNNRLSGEIPAWIGQLSNLAILKLSNNSFSGRIPLELGDCEKLIWLDLNTNSLNGSIPPELFKQSGKIEVNFISRKSYVYIKTDGSKQCHGAGNLLEFAGINMEQMSRISARSPCSFTSFTRVYNGKVRPKFSQGSMIFLDISHNRLSGALPKEMGSMNTLLILNLGYNDLSGNIPPEFGDMKNLNILDLSNNRLEGQIPQSLTGISMLTEIDLSSNNLSGLIPESGQFDTFPAAKFANNSGLCGVPLASCGSDSRAIANARHQRSNQRRASLARSVSIGLLFALFCILGLIIIAFEARKRRKKKEAALDVYIDSRSHSGTANAGWRVSAREALSINLATFEKPLRKLTFGDLVEATNGFHNDSLIGKGGFGDVYKAQLKDGSVVAIKKLIHISGQGDREFTAEMETIGKIKHRNLVPLLGYCKVGEERLLVYEYMKYGSLEDVLHDPKKSGMKLNWAARRKIAIGAARGLAFLHHNCIPHIIHRDMKSSNVLLDGNLEARVSDFGMARLMSAMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSSDFGDNNLVGWVKQHALLLRDVFDPELMKEDPSLEIELLQHLRVACACLDDRPMRRPTMIQVMAMFKEIQAGSGMDSQSTITSEDGGFGAMEMVDMSIKEIPELTSKQ 1187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi13g0247 1187 Pfam Brassinosteroid receptor island domain 580 647 IPR045381 -
Mibi13g0247 1187 Gene3D Ribonuclease Inhibitor 30 765 IPR032675 -
Mibi13g0247 1187 FunFam Brassinosteroid LRR receptor kinase 950 1150 - -
Mibi13g0247 1187 SUPERFAMILY RNI-like 258 575 - -
Mibi13g0247 1187 SUPERFAMILY L domain-like 39 353 - -
Mibi13g0247 1187 FunFam Leucine-rich repeat receptor protein kinase EMS1 500 591 - -
Mibi13g0247 1187 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 310 401 - -
Mibi13g0247 1187 ProSitePatterns Serine/Threonine protein kinases active-site signature. 996 1008 IPR008271 GO:0004672|GO:0006468
Mibi13g0247 1187 PRINTS Leucine-rich repeat signature 696 709 - -
Mibi13g0247 1187 PRINTS Leucine-rich repeat signature 314 327 - -
Mibi13g0247 1187 Pfam Leucine Rich Repeat 412 434 IPR001611 GO:0005515
Mibi13g0247 1187 SUPERFAMILY Protein kinase-like (PK-like) 860 1150 IPR011009 -
Mibi13g0247 1187 SMART serkin_6 874 1145 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi13g0247 1187 ProSitePatterns Protein kinases ATP-binding region signature. 880 903 IPR017441 GO:0005524
Mibi13g0247 1187 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 50 283 - -
Mibi13g0247 1187 Pfam Leucine rich repeat N-terminal domain 25 60 IPR013210 -
Mibi13g0247 1187 Pfam Leucine rich repeat 484 542 IPR001611 GO:0005515
Mibi13g0247 1187 Pfam Leucine rich repeat 693 733 IPR001611 GO:0005515
Mibi13g0247 1187 Pfam Leucine rich repeat 351 397 IPR001611 GO:0005515
Mibi13g0247 1187 CDD STKc_IRAK 880 1148 - -
Mibi13g0247 1187 Gene3D Transferase(Phosphotransferase) domain 1 950 1150 - -
Mibi13g0247 1187 Pfam Protein kinase domain 874 1143 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi13g0247 1187 FunFam serine/threonine-protein kinase BRI1-like 2 836 949 - -
Mibi13g0247 1187 SUPERFAMILY L domain-like 650 766 - -
Mibi13g0247 1187 ProSiteProfiles Protein kinase domain profile. 874 1148 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi13g0247 1187 Gene3D - 585 647 - -
Mibi13g0247 1187 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 647 765 - -
Mibi13g0247 1187 Gene3D Phosphorylase Kinase; domain 1 835 949 - -
Mibi13g0247 1187 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 408 499 - -
Mibi13g0247 1187 SMART LRR_typ_2 720 743 IPR003591 -
Mibi13g0247 1187 SMART LRR_typ_2 412 434 IPR003591 -
Mibi13g0247 1187 SMART LRR_typ_2 530 554 IPR003591 -
Mibi13g0247 1187 SMART LRR_typ_2 696 719 IPR003591 -
Mibi13g0247 1187 SMART LRR_typ_2 555 578 IPR003591 -
Mibi13g0247 1187 SMART LRR_typ_2 312 334 IPR003591 -
Mibi13g0247 1187 SMART LRR_typ_2 384 408 IPR003591 -
Mibi13g0247 1187 SMART LRR_typ_2 360 383 IPR003591 -
Mibi13g0247 1187 SMART LRR_typ_2 287 310 IPR003591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi13g0247 Mibi-ChrMibi13 2517319 2520882 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi13g0247 20 1182 Receptor kinase-like Gene Family AT4G39400 67.690 0.0 1515
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-1 Mibi13g0247 Pkinase 1.9e-45 CL0016