Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi13g0232 ATGGCAGGAAAGAAAAACAACCAAACCATCAGTCCTGCGGGAAGCCCAACTTCTGGGAACATTTCAGACAGTTCTTCCAAAGAACAAGACAGGTTCCTCCCCATCGCCAACGTTAGCCGTATAATGAAAAGGGCACTTCCAGCTAATGCCAAAATCTCCAAGGAAGCCAAAGAGACCGTCCAAGAATGTGTTTCTGAGTTCATAAGCTTCATCACTGGTGAAGCATCCGACAAGTGCCAGAGAGAGAAGAGGAAGACAATCAACGGCGACGATCTTCTGTGGGCTATGACAACGTTGGGGTTCGAGAACTACGTTGGACCCTTAAAGGTGTACCTCAGCAACTACAGAGAAACAGAGGGAGACAAGAGTTGTGTTGGTACTAAACCAGAAGATCAGGCTCAGACAGAAACAAATGATGGGGTCGTTGAGATGAACAAGTTGGCTAATTCTGTGTCAGCAAAATCAGATCTTGCTGGTTTTAATGGTGGGTTTTACTCTGTTATGTCTCAGGTTGCTCCAAAGAGCTTCGCTGAGATAGGAGGGTTCACTGGCTTCAGAGAGAACCCCATGAACATGGCTATTGCTCAAAGTGCAGTTCATAATGATGCAGATGGAAACCTGAGTTACAGGGTTGAATGGTAG 642 0.4611 MAGKKNNQTISPAGSPTSGNISDSSSKEQDRFLPIANVSRIMKRALPANAKISKEAKETVQECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFENYVGPLKVYLSNYRETEGDKSCVGTKPEDQAQTETNDGVVEMNKLANSVSAKSDLAGFNGGFYSVMSQVAPKSFAEIGGFTGFRENPMNMAIAQSAVHNDADGNLSYRVEW 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi13g0232 213 MobiDBLite consensus disorder prediction 1 29 - -
Mibi13g0232 213 ProSitePatterns NF-YB/HAP3 subunit signature. 63 79 IPR003956 GO:0005634|GO:0006355|GO:0043565
Mibi13g0232 213 SUPERFAMILY Histone-fold 29 143 IPR009072 GO:0046982
Mibi13g0232 213 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 32 96 IPR003958 -
Mibi13g0232 213 PRINTS CCAAT-binding transcription factor subunit A signature 98 116 - -
Mibi13g0232 213 PRINTS CCAAT-binding transcription factor subunit A signature 60 78 - -
Mibi13g0232 213 PRINTS CCAAT-binding transcription factor subunit A signature 79 97 - -
Mibi13g0232 213 FunFam Nuclear transcription factor Y subunit B-3 21 145 - -
Mibi13g0232 213 Gene3D Histone, subunit A 19 155 IPR009072 GO:0046982
Mibi13g0232 213 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 16 145 IPR027113 GO:0001228|GO:0006355|GO:0016602
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi13g0232 Mibi-ChrMibi13 2401881 2402522 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi13g0232 23 132 CCAAT-HAP3 Transcription Factor Family AT4G14540 80.909 2.27e-63 192
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Mibi13g0232 CBFD_NFYB_HMF 1.1e-26 CL0012