Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi13g0228 ATGAATTCCGTACCCAATTTCTCTGTTACAGTTTTCTCCCTTTGTTTCCTCTCTCTCCTCTTCTCCGGCCTGGCCTCCGAAGCTGAGCTCCGATCTCTGCTTGAATTCAAGAAAGGGATTAACATAGATCCAATTGGGAGAGTTTCCGACTCATGGAAGCTCTCTTCACTCACCGACCTCGACGACTGCCCTCATACTTGGGCTGGAATCGCCTGCGAAGACGGAAACGGCAACGTCACCGCCGTCGTACTCGATAGGTTCAATTTGGGAGGCGAGTTGAAATTTCACACTCTTCTTGAACTCAAGATGCTAAGAAATCTCAGCCTCGCTGGAAATTATTTCTCTGGGAGGTTGCCTCCTGCATTGGGCACATTGACCACTTTGCAGCATTTGGATCTTTCTGATAACAACTTCTACGGGCCGATCCCAGCTCGAATTAACGACCTCTGGGGATTGAATTACCTCAATTTGTCTGTGAATAAATTCAGGGGTGGGTTTCCTGGTGGGTTAACTAATCTTCAGCAGCTGAGAGTGCTGGATTTGAGCTTGAATGAGCTTTGGGGTGATATTGGTGATGTGTTGGCCTCATTGAGGAATGTGGAGCATCTTGATTTGAGCTCTAATAAGTTCTATGGGGGGATCTCGCTTGGAAAGGAGAATGTTTCTGGCTTGGCGAATACGGTCCATTTTCTTAATCTGAGTTACAATGATTTGAATGGCCGGTTCTTTGATAATGATTCAATTGCATTGTTTCGTAATTTGCAAGTTTTGGATTTGGGTCACAATCAGATCAGGGGGGAGCTTCCTTCTTCTTTTGGGTCATTGCCAAGTCTTCGTGTTTTGCGACTTGACAGTAATCTGTTGTACGGGTCAATACCGGAGGAATTGTTAGAAACCTCTATGTCAGTAGAAGAATTAGATCTTAGCGGCAACGGGTTTACGGGTTCAATTCCTTCAATCAACTCAACGTCTTTGAATATTTTGAATCTTTCATCAAATGGTTTGTCAGGCTCTTTGCCAACATCTTTGAGAAAATGCACTGTGATGGATTTGAGCAGGAATAATTTAGATGGTGATGTATCTGTTATACGGAACTGGGAAGCCACATTTGAGGTTCTTGATCTGAGTTCAAACAGGCTGTCGGGAAGCTTTCCCAATCTGACAAATCAGTTTGATGGATTAACCACCCTTGCTCTCGGGAACAATTCCTTAGTTGGAACTTTGCCTCCTAATTTGGGGACCTATTCTAAATTGTCCATAGTTGATTTCAGTTTGAATGGACTCAGTGGCTCTATTCCTGTTAGTTTATTTACTTCAACAACATTGACAAGCCTGAATCTTTCTGGAAATCATTTTAGTGGGTCAATTCCTCTTGAAAGCTCAGGAGCCAGTGAATTAATAATTATGACACCTTATCAGCCAATGGAATACCTTGATTTATCTAGTAATTCTTTGAAAGGTATCTTACCTTCTGACATTAGTAGGATGAGTGGGCTCAAACTATTGAATCTTGCCAGGAATGATTTTTCAGGACCACTGCCCAATGAGTTGAGCAAACTTGTTAATTTGGAGTACCTTGATTTGTCTAATAATAGATTTAATGGACAGATTCCTGATAAGCTTTCATCCAACTTGAATGTGTTTAATGTGTCCAATAACGATTTATCTGGTGATGTTCCGGTTAATTTGAGGAGGTTTCCTCCTACATCGTTTCACCCTGGAAATCAAAAGCTGAACTTACCAAATTTTAGTAGTGGTGCTTCAGTGCCTGATAATATTTATGGTAATGGAAAACGTCATAGTTCAAAGGGAAATATCAAGATAGCCATTATTCTTGCTTCAGTTGGTGCTGCTGTGATGATTGTTTTTGTTTTCTTGGCTTATCATAGAACACAGCTTAAAGAATTTCGTGGTCGAGGTGGATTCGCTGGTCAAAATACTGGAAGGGATATTAAATCAGGAGGGCTTGTACGGCCTTCCCTCTTCAAGTTTCACCCAAATGCTCAGCCACCAGCAAGTTCATTAAGCTTTTCAAATGATCACTTGCTGACATCCAATTCAAGATCACTCTCTGGACAGTCGGAGTTTGTAACTGAAATTACTGAGCAAGGCTTAGCGCAGGGAATGGGAGCAGCTAGTTCAGCTTCTGTAAATCCTAATTTGATGGATAACCCTCCCACATCATCTGGAAGGAAGTCATCTCCTGGTTCCCCATTATCTTCCTCTCCCCGTTTTATAGAAGCACATGAAAAACCAGTTATGTTGAATGTGTATTCACCAGATCGGCTGGCTGGAGAGTTGCACTTCCTTGATTCTTCCCTGGCATTCACTGCAGAGGAATTATCTCGAGCTCCAGCCGAAGTTCTTGGCAGAAGTAGCCATGGTACTTTATACAAAGCTACACTAGACAGTGGTCATATGTTGACTGTGAAGTGGTTACGTGTTGGATTGGTCAAACATAAGAAGGAATTTGCTAGAGAAGTTAAAAGGATTGGTTCTATGAGGCATCCAAACATTGTCCCATTACAGGCATACTATTGGGGTCCCAGGGAACAAGAGAGGCTTCTTTTAGCTGACTATATACCTGGCGACAGCTTGGCCTTACATCTTTATGAGACAACACCCCGGAGGTACTCACCATTATCATTCAGCCAGAGAGTAAGAGTTGCTGTTGAAGTTGCTCGGTGTCTTTTATACCTTCATGATCGAGGGCTTCCCCATGGAAATCTAAAACCAACAAATATATTATTAGCAGGCCCTGAATACAGTGCACGTCTAACTGACTATGGTCTGCACCGCCTCATGACGCCAGCCGGAATTTCAGAGCAGATACTAAACCTCGGAGCACTGGGATACCGGGCTCCAGAACTTGCCTCTGCTAATAAATCAGTGCCATCATTTAAGGCAGATGTGTATGCACTTGGAGTGATCTTAATGGAATTATTAACGAGAAAAAGTGCAGGCGACATAATATCTGGCCAATCCGGGGCTGTTGATCTAACAGATTGGGTTAGGCTTTGTGAGCAAGAAGGACGTGTAATGGACTGTATTGACAGAGACATTGCAGGCGGTGAAGAATCTTCCAGAGAGATGGACGAATTGCTTGCAATATCTCTCAGGTGTATTCTCCCTGTAAATGAGAGGCCTAATATCAGACAGGTTTTTGACGATCTTTGTTCTATATCAGCTTGA 3192 0.4279 MNSVPNFSVTVFSLCFLSLLFSGLASEAELRSLLEFKKGINIDPIGRVSDSWKLSSLTDLDDCPHTWAGIACEDGNGNVTAVVLDRFNLGGELKFHTLLELKMLRNLSLAGNYFSGRLPPALGTLTTLQHLDLSDNNFYGPIPARINDLWGLNYLNLSVNKFRGGFPGGLTNLQQLRVLDLSLNELWGDIGDVLASLRNVEHLDLSSNKFYGGISLGKENVSGLANTVHFLNLSYNDLNGRFFDNDSIALFRNLQVLDLGHNQIRGELPSSFGSLPSLRVLRLDSNLLYGSIPEELLETSMSVEELDLSGNGFTGSIPSINSTSLNILNLSSNGLSGSLPTSLRKCTVMDLSRNNLDGDVSVIRNWEATFEVLDLSSNRLSGSFPNLTNQFDGLTTLALGNNSLVGTLPPNLGTYSKLSIVDFSLNGLSGSIPVSLFTSTTLTSLNLSGNHFSGSIPLESSGASELIIMTPYQPMEYLDLSSNSLKGILPSDISRMSGLKLLNLARNDFSGPLPNELSKLVNLEYLDLSNNRFNGQIPDKLSSNLNVFNVSNNDLSGDVPVNLRRFPPTSFHPGNQKLNLPNFSSGASVPDNIYGNGKRHSSKGNIKIAIILASVGAAVMIVFVFLAYHRTQLKEFRGRGGFAGQNTGRDIKSGGLVRPSLFKFHPNAQPPASSLSFSNDHLLTSNSRSLSGQSEFVTEITEQGLAQGMGAASSASVNPNLMDNPPTSSGRKSSPGSPLSSSPRFIEAHEKPVMLNVYSPDRLAGELHFLDSSLAFTAEELSRAPAEVLGRSSHGTLYKATLDSGHMLTVKWLRVGLVKHKKEFAREVKRIGSMRHPNIVPLQAYYWGPREQERLLLADYIPGDSLALHLYETTPRRYSPLSFSQRVRVAVEVARCLLYLHDRGLPHGNLKPTNILLAGPEYSARLTDYGLHRLMTPAGISEQILNLGALGYRAPELASANKSVPSFKADVYALGVILMELLTRKSAGDIISGQSGAVDLTDWVRLCEQEGRVMDCIDRDIAGGEESSREMDELLAISLRCILPVNERPNIRQVFDDLCSISA 1063
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi13g0228 1063 FunFam Pollen receptor-like kinase 1 861 1063 - -
Mibi13g0228 1063 FunFam Leucine-rich repeat receptor protein kinase EMS1 469 562 - -
Mibi13g0228 1063 PRINTS Leucine-rich repeat signature 475 488 - -
Mibi13g0228 1063 PRINTS Leucine-rich repeat signature 520 533 - -
Mibi13g0228 1063 FunFam Nuclear pore complex protein NUP107 26 192 - -
Mibi13g0228 1063 Gene3D Transferase(Phosphotransferase) domain 1 862 1063 - -
Mibi13g0228 1063 Gene3D Ribonuclease Inhibitor 223 587 IPR032675 -
Mibi13g0228 1063 ProSiteProfiles Protein kinase domain profile. 783 1063 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi13g0228 1063 ProSiteProfiles Leucine-rich repeat profile. 253 275 IPR001611 GO:0005515
Mibi13g0228 1063 PANTHER OS07G0626500 PROTEIN 9 107 - -
Mibi13g0228 1063 Gene3D Ribonuclease Inhibitor 25 216 IPR032675 -
Mibi13g0228 1063 Pfam Leucine rich repeat 476 533 IPR001611 GO:0005515
Mibi13g0228 1063 Pfam Leucine rich repeat 252 311 IPR001611 GO:0005515
Mibi13g0228 1063 Pfam Leucine rich repeat 152 210 IPR001611 GO:0005515
Mibi13g0228 1063 MobiDBLite consensus disorder prediction 708 741 - -
Mibi13g0228 1063 SMART LRR_sd22_2 520 547 - -
Mibi13g0228 1063 SMART LRR_sd22_2 197 226 - -
Mibi13g0228 1063 SMART LRR_sd22_2 125 151 - -
Mibi13g0228 1063 SMART LRR_sd22_2 251 277 - -
Mibi13g0228 1063 Pfam Protein kinase domain 787 1053 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi13g0228 1063 Pfam Leucine Rich repeat 125 137 IPR001611 GO:0005515
Mibi13g0228 1063 Pfam Leucine Rich repeat 439 454 IPR001611 GO:0005515
Mibi13g0228 1063 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 245 468 - -
Mibi13g0228 1063 FunFam Leucine-rich repeat receptor-like protein kinase 768 860 - -
Mibi13g0228 1063 SUPERFAMILY RNI-like 106 555 - -
Mibi13g0228 1063 MobiDBLite consensus disorder prediction 708 745 - -
Mibi13g0228 1063 SUPERFAMILY Protein kinase-like (PK-like) 786 1058 IPR011009 -
Mibi13g0228 1063 SMART LRR_typ_2 275 299 IPR003591 -
Mibi13g0228 1063 SMART LRR_typ_2 391 415 IPR003591 -
Mibi13g0228 1063 SMART LRR_typ_2 520 544 IPR003591 -
Mibi13g0228 1063 SMART LRR_typ_2 125 149 IPR003591 -
Mibi13g0228 1063 SMART LRR_typ_2 251 274 IPR003591 -
Mibi13g0228 1063 Pfam Leucine rich repeat N-terminal domain 27 72 IPR013210 -
Mibi13g0228 1063 Gene3D Phosphorylase Kinase; domain 1 764 860 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi13g0228 Mibi-ChrMibi13 2373991 2378831 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi13g0228 33 1054 Receptor kinase-like Gene Family AT5G01890 28.291 2.09e-83 290
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Mibi13g0228 Pkinase 4.4e-29 CL0016