Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi13g0224 ATGAATTCAACATCCACACAGTTTGTTTCCTCAAGAAGGATGGGTTTATATGATCCTATCCACCAGATTAGCATGTGGGAAGAAAACTTCAAAAGTAATTGCAATTTAAGTGCATCTGTGCCCTTAATTGGTGAGGCAGATATGAAGTTAGATAATCAGTCAGAAGATTCTTCACATGGAATGCTCGGGATTCCAAAGAGTTATGAACAAGAATCTAACAAGTCTGTTGAAAAGATACAAAGACGCCTTGCACAAAATCGAGAGGCTGCTCGTAAGAGTCGTCTGCGAAAAAAGGCTTATGTTCAGCAATTAGAATCAAGTCGTTTGAAGCTGATCAAGTTAGAGCAGGAGCTGGATCGAGCAAGACAGCAGGGATCTTTAATAGGCTGTGGATTGGATTCTGATAATTTGGTATTTTCTGGATCTGTAAACTCAGGCATTGCAACCTTTGAGATGGAGTATGGGCACTGGGTGGAAAAACAAAATAGACAAATTTGTGAGCTGAGAACTGCTTTAAATGTTCACACCAGTGACATAGAGCTCAGAATACTTGTAGATGGCATAATGAATCACTATTCTGACCTTTTCCGCATGAAATCAGCAGCTGCAAAAGTGGATGTTTTCTATGTCTTGTTTGGCATGTGGAAAACAACAGCTGAACGGTTTTTCTTGTGGATTGGAGGATTCCGCCCATCCGAGCTTTTGAAGGTTCTTGTCCCTTTGATAGAACCCTTGACAGAACAACAACGAATGGATGTTTACAACCTAGGACAATCATGCCAGCAAGCAGAAGATGCCCTGTCACAAGGCAGGGACAGACTTCAGCAGATGCTTGTTGAAACAGTTGCCGCCGGACAAGTGGTCGATGGAACTTACATTCCTCAGATGGCTATTGCAGTGGAGAAGTTGGAAGCTTTGGTGAGCTTTGTGAACCAGGCTGATCATCTTCGACAGGAAACACTGCAACAAATGTTTAGAATCCTTACCATTCGTCAGGCAGCTCGGTGCTTGCTTGCTTTAGGGGAATACTTCCAACGCTTGAGGGCTTTGAGCTCCCTTTGGGCTAATCGTCCTTCTGAACCACCTGCTTAA 1092 0.4313 MNSTSTQFVSSRRMGLYDPIHQISMWEENFKSNCNLSASVPLIGEADMKLDNQSEDSSHGMLGIPKSYEQESNKSVEKIQRRLAQNREAARKSRLRKKAYVQQLESSRLKLIKLEQELDRARQQGSLIGCGLDSDNLVFSGSVNSGIATFEMEYGHWVEKQNRQICELRTALNVHTSDIELRILVDGIMNHYSDLFRMKSAAAKVDVFYVLFGMWKTTAERFFLWIGGFRPSELLKVLVPLIEPLTEQQRMDVYNLGQSCQQAEDALSQGRDRLQQMLVETVAAGQVVDGTYIPQMAIAVEKLEALVSFVNQADHLRQETLQQMFRILTIRQAARCLLALGEYFQRLRALSSLWANRPSEPPA 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi13g0224 363 FunFam BZIP family transcription factor 77 126 - -
Mibi13g0224 363 PANTHER TRANSCRIPTION FACTOR TGA9 1 360 - -
Mibi13g0224 363 Coils Coil 97 124 - -
Mibi13g0224 363 SUPERFAMILY Leucine zipper domain 78 114 IPR046347 GO:0003700|GO:0006355
Mibi13g0224 363 MobiDBLite consensus disorder prediction 53 74 - -
Mibi13g0224 363 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 81 96 IPR004827 GO:0003700|GO:0006355
Mibi13g0224 363 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 76 118 IPR004827 GO:0003700|GO:0006355
Mibi13g0224 363 Pfam bZIP transcription factor 78 108 IPR004827 GO:0003700|GO:0006355
Mibi13g0224 363 Gene3D - 76 128 - -
Mibi13g0224 363 Pfam Seed dormancy control 164 239 IPR025422 GO:0006351|GO:0043565
Mibi13g0224 363 ProSiteProfiles DOG1 domain profile. 147 357 IPR025422 GO:0006351|GO:0043565
Mibi13g0224 363 SMART brlzneu 74 138 IPR004827 GO:0003700|GO:0006355
Mibi13g0224 363 Coils Coil 260 280 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi13g0224 Mibi-ChrMibi13 2342065 2344360 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi13g0224 1 361 Calmodulin-binding Proteins AT5G10030 69.146 0.0 512
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Mibi13g0224 DOG1 2.5e-30 No_clan