Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mibi13g0220 | ATGGCTTCTATATGCTCCCAGATTGAGTCTTCTGATGCTTTATTCCTTGAGCCTATGATTGGAGCTCTGGGAAAACTCACAGTTGAGCACGGAGTTCCTCCTACTTCAAATTCTTGGTCATGTCAGAACAGAAGTAGTGGCCATGCCATCTGCTCTAGGAAGACCTATGTAGGTTGTGGCGTAGCCCAGATTGGCAAGATGTTTTGCCTTTGGGACTGGGAATACATTTACCATCAACATTTGGCAGAGACAGCCATGAAAGCTATCTCTGACTTTTTCTTTCTTCTCTATGCAAAGACCATAGTCCTTGTGGTCTTCCTGCTCATACAACTCATCATCCTCATTCGAAACCTCAAAACACACACCTCTCCAATTACCATATCCCAGTACCTTCAACTCATTGAAGAGAAAAATCCCTCTGTTTGTTTCAGCAGAACACTGAATATTGCAGACCAACAAGAGTGCAGGGTTTGCTTATCTGAGCTTCAAGAAGGAGACAAAGTTAGGACCTTGAAATGTAAACACACATTTCATAAAGAATGTTTAGACCGCTGGTTACTTCAGTTTTGGGCAACTTGTCCTCTCTGTAGGAACAGAGTACTTCCAGAAGATGTCGTCACCAATTATCGACAGCTTGGGAATCAGAGGGAATTGATCATCTTTCCCTTCTGGGATTCCTCGGAAGATTAA | 690 | 0.4304 | MASICSQIESSDALFLEPMIGALGKLTVEHGVPPTSNSWSCQNRSSGHAICSRKTYVGCGVAQIGKMFCLWDWEYIYHQHLAETAMKAISDFFFLLYAKTIVLVVFLLIQLIILIRNLKTHTSPITISQYLQLIEEKNPSVCFSRTLNIADQQECRVCLSELQEGDKVRTLKCKHTFHKECLDRWLLQFWATCPLCRNRVLPEDVVTNYRQLGNQRELIIFPFWDSSED | 229 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mibi13g0220 | 229 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 133 | 204 | IPR013083 | - | |
| Mibi13g0220 | 229 | SMART | ring_2 | 155 | 196 | IPR001841 | - | |
| Mibi13g0220 | 229 | PANTHER | - | 86 | 215 | - | - | |
| Mibi13g0220 | 229 | Pfam | Ring finger domain | 154 | 197 | IPR001841 | - | |
| Mibi13g0220 | 229 | SUPERFAMILY | RING/U-box | 142 | 203 | - | - | |
| Mibi13g0220 | 229 | CDD | mRING-H2-C3H2C2D_ZSWM2 | 154 | 197 | - | - | |
| Mibi13g0220 | 229 | ProSiteProfiles | Zinc finger RING-type profile. | 155 | 197 | IPR001841 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Mibi13g0220 | Mibi-ChrMibi13 | 2309329 | 2313707 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Mibi13g0220 | 154 | 219 | C3H Transcription Factor Family | AT1G15100 | 52.239 | 3.24e-17 | 74.3 |