Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi13g0182 ATGGCTGTCACACCTTTTGGAAGCACATGTATTGCACAATGGGGAATCCGTCCTCAGTTATTTATGAGATCCTGTATGACAGGCAGGTTTATATCATCGGGCTTCAGTGTTACAAGTAGGGTAAACTTTATGGCTGCCCCAAGTTCAAGCTTTTTTGGTGGTGATTCTTTGCATGCGCTATGTGACCTGGGTTCTTCTCAAACTTTTCATCGTCGCAAGGGATCAAGGTTAATAGTTAGAGCAGATGTAGATTACTATTCTGTTCTTGGGGTGTCAAGAAATGCTAGTAAATCTGAAATTAAGACTGCTTATCGGAAGCTTGCCCGGAATTGTCACCCAGATGTAAACAAAGAACCTGGCGCAGAACAGAAGTTTAAGGAAATTAGCAACGCATATGAGGTCTTATCAGATGATGAGAAACGGTCCATATATGACAGATATGGAGAGGCTGGGCTTAAAGGTTCTGGAATGGGCATGGGGGATTTCAGTAATCCCTTTGATCTGTTTGAGACTCTGTTTGAGGGTATGAATCGGGGCAGAGGTTCCTGGAATGGAGCTCTTGATGGTGAAGATGAGTATTATAGTCTTGTCTTGAACTTTAAGGAAGCAGTTTTTGGAGTAGAAAAAGAGGTAGAGATCAGCCGGCTAGAGAGCTGTGGAACTTGCAATGGTTCAGGGGCTAAACCAGGAACCCAGCCGACCAGATGCAGCACTTGTGGGGGTCAAGGTAGGGTTGTCTCATCAACGAGGACACCATTAGGTATATTCCAGCAGTCAATGACATGTTCTTCATGCAATGGGACTGGAGAAATTTCAACACCATGCAATACATGTTCTGGGGATGGTCGAGTGCGAAGGACAAAACGGATAAGTCTGAAAGTTCCAGCTGGTGTAGACTCTGCTAGCCGTTTAAGGGTCCGAAACGAAGGAAATGCTGGAAGGCGAGGTGGTTCTCCAGGTGATCTCTTTGTTGTTATTGAAGTTATCCCGGACCCAGTCCTTAAACGTGATGACACCAACATTCTATACACTTGCAAGGTGTCATACATAGATGCAATCTTGGGAACTACAATCAAGGTTCCTACCGTAGATGGCATGGTGGATTTAAAAATCCCTGCCGGCACCCAACCAAACACAACACTTGTTATGGCTAGAAAAGGTGTTCCTCTGCTGAACAAGAGCAGTATGAGGGGTGATCAGTTGGTTCGGGTACTAGTTGAAATCCCCAAAAAGTTAAACAGCGATGAGAGGAAGCTTATTGAGGAACTTGCTGATTTAAGCAAAGGCAAGACTGCGACTAGTAAGAGATAA 1311 0.4462 MAVTPFGSTCIAQWGIRPQLFMRSCMTGRFISSGFSVTSRVNFMAAPSSSFFGGDSLHALCDLGSSQTFHRRKGSRLIVRADVDYYSVLGVSRNASKSEIKTAYRKLARNCHPDVNKEPGAEQKFKEISNAYEVLSDDEKRSIYDRYGEAGLKGSGMGMGDFSNPFDLFETLFEGMNRGRGSWNGALDGEDEYYSLVLNFKEAVFGVEKEVEISRLESCGTCNGSGAKPGTQPTRCSTCGGQGRVVSSTRTPLGIFQQSMTCSSCNGTGEISTPCNTCSGDGRVRRTKRISLKVPAGVDSASRLRVRNEGNAGRRGGSPGDLFVVIEVIPDPVLKRDDTNILYTCKVSYIDAILGTTIKVPTVDGMVDLKIPAGTQPNTTLVMARKGVPLLNKSSMRGDQLVRVLVEIPKKLNSDERKLIEELADLSKGKTATSKR 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi13g0182 436 Gene3D DnaJ domain 81 183 IPR036869 -
Mibi13g0182 436 ProSitePatterns Nt-dnaJ domain signature. 125 144 IPR018253 -
Mibi13g0182 436 PANTHER DNAJ HOMOLOG 1, MITOCHONDRIAL-RELATED 48 434 - -
Mibi13g0182 436 CDD DnaJ 84 137 IPR001623 -
Mibi13g0182 436 ProSiteProfiles dnaJ domain profile. 84 148 IPR001623 -
Mibi13g0182 436 ProSiteProfiles Zinc finger CR-type profile. 206 287 IPR001305 GO:0031072|GO:0051082
Mibi13g0182 436 TIGRFAM DnaJ_bact: chaperone protein DnaJ 84 425 IPR012724 GO:0005524|GO:0006457|GO:0009408|GO:0051082
Mibi13g0182 436 FunFam Chaperone protein dnaJ A6 chloroplastic 81 184 - -
Mibi13g0182 436 FunFam Molecular chaperone DnaJ 211 287 - -
Mibi13g0182 436 SUPERFAMILY HSP40/DnaJ peptide-binding domain 334 420 IPR008971 GO:0006457|GO:0051082
Mibi13g0182 436 Pfam DnaJ C terminal domain 194 409 IPR002939 -
Mibi13g0182 436 FunFam Chaperone protein dnaJ 1, mitochondrial 329 436 - -
Mibi13g0182 436 Gene3D - 329 436 - -
Mibi13g0182 436 Pfam DnaJ domain 84 145 IPR001623 -
Mibi13g0182 436 Gene3D - 189 324 - -
Mibi13g0182 436 Gene3D - 219 282 - -
Mibi13g0182 436 SUPERFAMILY DnaJ/Hsp40 cysteine-rich domain 206 285 IPR036410 -
Mibi13g0182 436 SMART dnaj_3 83 140 IPR001623 -
Mibi13g0182 436 CDD DnaJ_zf 219 282 IPR001305 GO:0031072|GO:0051082
Mibi13g0182 436 FunFam Putative Mitochondrial DnaJ chaperone 274 324 - -
Mibi13g0182 436 Hamap Chaperone protein DnaJ [dnaJ]. 81 432 IPR012724 GO:0005524|GO:0006457|GO:0009408|GO:0051082
Mibi13g0182 436 Pfam DnaJ central domain 219 282 IPR001305 GO:0031072|GO:0051082
Mibi13g0182 436 SUPERFAMILY Chaperone J-domain 80 178 IPR036869 -
Mibi13g0182 436 CDD DnaJ_C 190 412 - -
Mibi13g0182 436 PRINTS DnaJ domain signature 120 140 IPR001623 -
Mibi13g0182 436 PRINTS DnaJ domain signature 140 159 IPR001623 -
Mibi13g0182 436 PRINTS DnaJ domain signature 86 104 IPR001623 -
Mibi13g0182 436 PRINTS DnaJ domain signature 104 119 IPR001623 -
Mibi13g0182 436 SUPERFAMILY HSP40/DnaJ peptide-binding domain 187 341 IPR008971 GO:0006457|GO:0051082
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi13g0182 Mibi-ChrMibi13 1971871 1974520 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi13g0182 85 147 C2H2 Transcription Factor Family AT1G74250 42.029 5.31e-09 56.6