Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi13g0172 ATGAAGAGACTTGGCAGCTCAGATTCTTTGGGCTCTCTACTGCCCATATGTCAATCCACAGATGTACACAGTCCAAGAAACTCAAATCGAGCATACAGTAGTAGGGAGTTTCAGTCCATGTTGGAAGGGCTTGACGAAGAAGGATGTGTGGAAGAGTTAGGCCACCAAACTGAGAAGAAACGACGATTAACGGTGGATCAAGTGAAGGCTCTGGAGAAGAACTTCGAAGTAGAAAACAAGCTTGAACCAGAGAGGAAGGTGAAGCTTGCTCAAGAACTTGGACTACAGCCAAGGCAAGTGGCTGTATGGTTCCAAAATCGTCGAGCAAGATGGAAAACCAAGCAATTAGAGAGAGATTATGGCGTCCTCAAAGCAAATTATGACTCTCTCAAAGTTAACTATGATTCCCTCCAACAAGACAATGAAGCCTTGCTCAAAGAGATTAAGGAACTGAAATCTAGATTGGAGGGTCAAGAGAAGAGTGAAGATGTTTCGTTGAATAAAAATGGAGAAACAAAGCAGCCAAAATCTGAGGAGAAAGTGATGATGGGACTAAGTGTGGAACCACCTTCTGAAACGGCCATTCAAGAAGACTTGAATTACGAATGCTTCAATGGAAACGTCGTCGTCGGAGGCTGTTCACTGTTCACTCCTGCGGATTTCAACAGAGACGGTGCTTCTGATAGCGATTCTAGCGCAATCTTGAACGAAGATCCAGGTGGTTCTTCTTCATTCAAGTTCAATTGTTCTTCTTCATCGTTTCAGTTTCAGAAAACTTACCAGAGTCCTCAGACTCATCAGTATGTGAAGATGGAAGAACATAACTTCTTTAGCACTGACGAGGCCTGCAATTTCTTCTCCGATGAACAGGCCCCGACACTCCAATGGTGCTGGACTTAA 900 0.44 MKRLGSSDSLGSLLPICQSTDVHSPRNSNRAYSSREFQSMLEGLDEEGCVEELGHQTEKKRRLTVDQVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTKQLERDYGVLKANYDSLKVNYDSLQQDNEALLKEIKELKSRLEGQEKSEDVSLNKNGETKQPKSEEKVMMGLSVEPPSETAIQEDLNYECFNGNVVVGGCSLFTPADFNRDGASDSDSSAILNEDPGGSSSFKFNCSSSSFQFQKTYQSPQTHQYVKMEEHNFFSTDEACNFFSDEQAPTLQWCWT 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi13g0172 299 CDD homeodomain 59 115 IPR001356 GO:0003677
Mibi13g0172 299 Pfam Homeodomain 59 112 IPR001356 GO:0003677
Mibi13g0172 299 ProSitePatterns 'Homeobox' domain signature. 89 112 IPR017970 GO:0000981|GO:0006355
Mibi13g0172 299 PRINTS Lambda-repressor HTH signature 94 110 IPR000047 GO:0003677
Mibi13g0172 299 PRINTS Lambda-repressor HTH signature 85 94 IPR000047 GO:0003677
Mibi13g0172 299 SUPERFAMILY Homeodomain-like 40 116 IPR009057 -
Mibi13g0172 299 MobiDBLite consensus disorder prediction 156 180 - -
Mibi13g0172 299 Gene3D - 53 121 - -
Mibi13g0172 299 MobiDBLite consensus disorder prediction 156 178 - -
Mibi13g0172 299 SMART HOX_1 57 118 IPR001356 GO:0003677
Mibi13g0172 299 FunFam Homeobox-leucine zipper protein HAT5 52 116 - -
Mibi13g0172 299 Pfam Homeobox associated leucine zipper 114 155 IPR003106 GO:0006355|GO:0043565
Mibi13g0172 299 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN 42 298 IPR045224 GO:0003700
Mibi13g0172 299 ProSiteProfiles 'Homeobox' domain profile. 54 114 IPR001356 GO:0003677
Mibi13g0172 299 Coils Coil 127 161 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi13g0172 Mibi-ChrMibi13 1881656 1883133 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi13g0172 1 296 Homeobox Transcription Factor Family AT4G40060 50.000 2.26e-75 231
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Mibi13g0172 Homeodomain 1.5e-16 CL0123