Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi13g0160 ATGCCTACCCCTTCTTTAATTTTACCTGATACTCAAGATTCTTCTTCCTCTTTGAAGCGGAAGAGGCCTCCCAATATTCAGATCCCAGACGTCTTGCAAGAAATCAAGATACCCAAGCTTCATGATTCCAAGGCATTGAAGGACGAAATTTCTCTTTGTGGGATTGGTTTTGGGGTTTTTTCTGTTAAAGGCAAGAAATTGTTCATGGAAGATGCTCACAAGATTGTTTCTTCTTTAGACAGCAACCCAAAAAATGGCTTTTTTGGCGTATACGATGGGCATGGCGGTCGGAAGGCCGCAGAGTTTGTCGTTGAGAATTTACACGCCAATATTCTACAAATGGTGGAGAATTGTGAGGAATCAAGGACCAAAGAGGAGGCAGTTAAAGCTGGGTATCTAAAGACCGACGAAGAGTTCTTGAAAAAGGGAATAGGAAGCGGTGCCTGTTGTGTGACAGCACTGATCCAAGGGGAAGAGATTGTTGTTTCAAACTTGGGAGATTGTAGGGCTGTTCTTTGCAGAGGTGGAGTGGCTGAAGTTCTAACTAGAGATCACAGAGCAGAACTAGAGGATGAACGGACAAGAATTGAGGAAAAGGGAGGTTATGTGGAGATCCATCGAGGAGCTTGGAGAGTTCATGGGGTGCTCTCTGTTTCTAGAAGCATTGGGGATGCTCATCTGAAAGAGTGGGTGGTGGCTGAGCCTGATACCAAGATCTTACAGTTAACTTCAGACATGGAGTTTCTTGTGTTAGCTTCTGATGGATTATGGGAAGAGGTTGGTAATCAAGAAGCTATTGATACTGTGACACGTTTTTGTGGAAATGAAGAGAAGCTAAGATCTTTAGTAGATGTACAAAATGATATTGATGATGATTGTTGTCAAGTAAACGTAAGTCCATCATCGAAGCTACGAAGAGTTTCACTTGTGAAGCAATCAAGAAGCCATAAAAAGAAACAAAATGGATGGAATGAAGACTGTGAAGATGATTTTGGTCGTGAAAATGAAAGCCCTCCATCAAAATCACGAAGAATTTCATTGGTGAAACGAGTGAACATGAAAAAAGAGGTGCCAGGTAAAGAAAGCAATATGGGTAAGAAAAGTGAAAGCTCTAGACTTCTAGCAGCCTGTAAGGAGCTTGTAAACCTTGCTGTTAAAAGGGGGACATTGGATGATATCACTGTAATGATTATTGATTTAAAACACTACAGGCATCACATATAA 1224 0.4142 MPTPSLILPDTQDSSSSLKRKRPPNIQIPDVLQEIKIPKLHDSKALKDEISLCGIGFGVFSVKGKKLFMEDAHKIVSSLDSNPKNGFFGVYDGHGGRKAAEFVVENLHANILQMVENCEESRTKEEAVKAGYLKTDEEFLKKGIGSGACCVTALIQGEEIVVSNLGDCRAVLCRGGVAEVLTRDHRAELEDERTRIEEKGGYVEIHRGAWRVHGVLSVSRSIGDAHLKEWVVAEPDTKILQLTSDMEFLVLASDGLWEEVGNQEAIDTVTRFCGNEEKLRSLVDVQNDIDDDCCQVNVSPSSKLRRVSLVKQSRSHKKKQNGWNEDCEDDFGRENESPPSKSRRISLVKRVNMKKEVPGKESNMGKKSESSRLLAACKELVNLAVKRGTLDDITVMIIDLKHYRHHI 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi13g0160 407 Gene3D - 50 406 IPR036457 -
Mibi13g0160 407 SUPERFAMILY PP2C-like 51 402 IPR036457 -
Mibi13g0160 407 MobiDBLite consensus disorder prediction 1 23 - -
Mibi13g0160 407 ProSitePatterns PPM-type phosphatase domain signature. 87 95 IPR000222 GO:0043169
Mibi13g0160 407 ProSiteProfiles PPM-type phosphatase domain profile. 56 400 IPR001932 -
Mibi13g0160 407 SMART PP2C_4 42 398 IPR001932 -
Mibi13g0160 407 MobiDBLite consensus disorder prediction 309 343 - -
Mibi13g0160 407 MobiDBLite consensus disorder prediction 318 340 - -
Mibi13g0160 407 Pfam Protein phosphatase 2C 56 294 IPR001932 -
Mibi13g0160 407 MobiDBLite consensus disorder prediction 1 22 - -
Mibi13g0160 407 CDD PP2Cc 55 284 IPR001932 -
Mibi13g0160 407 PANTHER PROTEIN PHOSPHATASE 2C 33 399 IPR015655 GO:0004722|GO:0006470
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi13g0160 Mibi-ChrMibi13 1785272 1787147 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi13g0160 2 404 PP2C-type Phosphatase Gene Family AT1G67820 52.826 3.23e-133 386