Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi13g0156 ATGGTGGGAGATGAAGGCAAGGACTGTTCACCCGGCGGCGGCGGTCGGAGAACATACTCACGTTCTGTTTCTTGGACTGATCGATCTCCGACAAACATTAGCCAAAACCGTCGGCCGCCGACAAATAGCAAGCCACGGCCTTTGTTGCCTCCTCTTCAGCCTCTCTCCATCATGAAACGGAGTTCTGAGGAGTGGCCTAGTGCAGGATCTGATGATCTTGGAGTTTGGCCTCTTCCTCAAACCCCAAGAGGATCTGTCAAACCCTTGGATTGTTCGGATTCGGGTCAACCCGCAAAAGAATTTCAGTTCAAGAGGGATAAATTAGCGTTCTTTGACAAGGAGTGTTCAAGAATTGCGGAGCATATTTATCTGGGGAGTGATACAGTTGCGAAAAATCATGAGCTTTTGAGGCAAAATGGGATTACCCACGTGCTTAACTGTGTTGGGTTTGTTTGTCCTGAGTATTTCAAGAGTGATTTTGTGTATAAGACACTTTGGTTACAGGATAGCCCCACTGAGGATATTACCAGCATACTCTATGATGTTTTTGATTACTTTGAGGATGTTCGAGAGCAAGGTGGGCGTGTGCTTGTGCATTGTTGCCAGGGGGTTTCTAGATCATCCTCTCTGGTAATTGCTTATCTCATGTGGAGAAAAGGTCAGAGCTTTGAGGATGCTTTTCAATATGTGAAGACTGCACGAGGAGTGACTAATCCAAATATGGGTTTTGCTTGTCAACTTCTTCAGTGTCAGAAACGTGTGCTTGCTATGCCTGCAAGTCCGAATTCCATTCGCAGGATGTATCGCATGGCGCCTCACTCACCTTATGATCCTCTTCATTTGGTCCCCAAAATGGTAAACCATCCAGGTGCTAGAGCTCTTGATTCTCGTGGGGCTTTCATTATTCATGTCCCTTCTGCTATATATGTTTGGAGTGGAAAATTTTGCAGCTCGGCGATGACGTGTAATGCTAGAGCTGCAGCATGTCAGGTAATCCGTTATGAGAAGGCGAAGGGTCCAATTCAGAGCATCAAAGAAGGCGAAGAACCTATGGACTTTTGGATTGCTCTTGCTAACGAGCAAATCTTATCATCAGGCCATGAAAGTGTGGAGGTTCCTGAAGCTGGTACTAGTAGTACTATGGAGATCAGTGAGAGAGAAAATGTTAGTGAGTATGATTTGGATTTTGAGATTTTCCATAAGGCACTTGCTGGTGGGGTTGTTCCTCCTATTTCTGTTTCGAGTGCTGGATCAGAAACTTGCTTACCTGCAAGGGAAAACGGTTGGAGTAGATTGAGGAAGAATTTTGCTCTTGGTATGATGAAAGAATGGCTCACTTCATCATGTAAATGGAGCTGTGAAGTTGTTAGCACCAAATCCGCAGATGAGTGCTGTGTGATTATGCAAGAAGAAAAACAAGATTCTGAGGTTGATCCTAATTTGTCACAAGCATCACCTACCCATCCCTGTGGTTCCCCCGATTCTTTTGAATGTTTTCCAGATAACCGCTCAGACATGGCAAAGGATAGCACTATTGAAGACGAAGTCATGGATTTCTCTGTTCCTCCTACTTCAAGTTCTTTTTCTTGTTTTCTAAGCAACAGCCCAAAATTCAATTCCAAGTCCCCAACGCTCTCACCCTCGAGTTCTGATTATGCCAGTTCGTTCACATTTTCACCTTCATCAACAAATTGGTCTGACTTGTCGCTTGTGTCTTCTAGGCAGCCTTCGCCTTCTAGCATCGAACCAACCGAACCTTTTTATGCTAAAGATCTTTCTTTCTCTGAGAATTCTTTACTTCTCAAAGCTGTTTCTTCGCCTAAAGAGGAGCCATTTTGTGCTAATTCAATGGGAGGGGTAAGCACCTATTTGCTTGGTGAAGGGTCTTCCCCTTCCCTTGCAGAGCGCAGAGGGAGTAATCCTCCACCTCGTATGTTTCTTCCCTCTATCAATGAGTCATCTCATAACCATACCAACCTGGTAAGAACAGAGTCATTCTCTCTGCCTGACTTAGATGGTAATGAAATGGAAGATGTTAGTCTGAAGCAATCTGATGATGAAATCAACGGAAAAGGGAAAGAGCCAATAGAAAATACTGATGTTAGTTCAGGAAGTGGTGAATCACAGAGTGAAAATAATGACAGTGATCATAATATGCGACTGTGTTATGTGATATAG 2178 0.4417 MVGDEGKDCSPGGGGRRTYSRSVSWTDRSPTNISQNRRPPTNSKPRPLLPPLQPLSIMKRSSEEWPSAGSDDLGVWPLPQTPRGSVKPLDCSDSGQPAKEFQFKRDKLAFFDKECSRIAEHIYLGSDTVAKNHELLRQNGITHVLNCVGFVCPEYFKSDFVYKTLWLQDSPTEDITSILYDVFDYFEDVREQGGRVLVHCCQGVSRSSSLVIAYLMWRKGQSFEDAFQYVKTARGVTNPNMGFACQLLQCQKRVLAMPASPNSIRRMYRMAPHSPYDPLHLVPKMVNHPGARALDSRGAFIIHVPSAIYVWSGKFCSSAMTCNARAAACQVIRYEKAKGPIQSIKEGEEPMDFWIALANEQILSSGHESVEVPEAGTSSTMEISERENVSEYDLDFEIFHKALAGGVVPPISVSSAGSETCLPARENGWSRLRKNFALGMMKEWLTSSCKWSCEVVSTKSADECCVIMQEEKQDSEVDPNLSQASPTHPCGSPDSFECFPDNRSDMAKDSTIEDEVMDFSVPPTSSSFSCFLSNSPKFNSKSPTLSPSSSDYASSFTFSPSSTNWSDLSLVSSRQPSPSSIEPTEPFYAKDLSFSENSLLLKAVSSPKEEPFCANSMGGVSTYLLGEGSSPSLAERRGSNPPPRMFLPSINESSHNHTNLVRTESFSLPDLDGNEMEDVSLKQSDDEINGKGKEPIENTDVSSGSGESQSENNDSDHNMRLCYVI 725
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi13g0156 725 Gene3D Severin 267 364 IPR029006 -
Mibi13g0156 725 MobiDBLite consensus disorder prediction 696 717 - -
Mibi13g0156 725 ProSiteProfiles Dual specificity protein phosphatase domain profile. 114 256 IPR020422 GO:0006470|GO:0008138
Mibi13g0156 725 MobiDBLite consensus disorder prediction 1 74 - -
Mibi13g0156 725 MobiDBLite consensus disorder prediction 646 665 - -
Mibi13g0156 725 SMART dsp_5 114 253 IPR020422 GO:0006470|GO:0008138
Mibi13g0156 725 Pfam Dual specificity phosphatase, catalytic domain 122 252 IPR000340 GO:0008138|GO:0016311
Mibi13g0156 725 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 105 256 IPR029021 -
Mibi13g0156 725 MobiDBLite consensus disorder prediction 561 582 - -
Mibi13g0156 725 ProSitePatterns Tyrosine specific protein phosphatases active site. 198 208 IPR016130 GO:0016311|GO:0016791
Mibi13g0156 725 MobiDBLite consensus disorder prediction 624 721 - -
Mibi13g0156 725 MobiDBLite consensus disorder prediction 561 585 - -
Mibi13g0156 725 CDD DSP 115 249 - -
Mibi13g0156 725 Gene3D Protein tyrosine phosphatase superfamily 94 255 IPR029021 -
Mibi13g0156 725 MobiDBLite consensus disorder prediction 675 694 - -
Mibi13g0156 725 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 173 234 IPR000387 GO:0016311|GO:0016791
Mibi13g0156 725 SUPERFAMILY Actin depolymerizing proteins 260 362 - -
Mibi13g0156 725 PANTHER MKPA PROTEIN 11 665 - -
Mibi13g0156 725 MobiDBLite consensus disorder prediction 17 42 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi13g0156 Mibi-ChrMibi13 1762827 1765004 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi13g0156 1 150 Protein tyrosine phosphatase (PTP) family AT3G55270 44.086 1.20e-32 133