Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi13g0154 ATGGACTACGTTACGGAGTTTCCTCACTCTCACGTGGATCAGCGTCCCAGGAAAAGGGCTAAATTAGCTTGGGAATTTCCTCAAACCCAATCCAAGGCTTATTCAGGGATGTGTTATGGACAAGAGGTTGCAAATATGACAAGCTTTGGAGCAACAAGGATACTACCTGACCACTCTGGCCTATTTGTGAAGGGGTTGGCTGAAAAGGGTTCTCCCCCATGGAGAGATGATGACAAAGATGGACATTACATGTTTGCACTTGGTGACAATTTAACACCTCGATATAAGATCCTCCGAAAAATTGGTGAAGGTACTTTTGGTCAGGTTCTGGAATGTTGGGATAGAGAAATGAGGGTGCTGGTGGCTATAAAGGTTGTTCGAAGTATTAAGAAATACCGTGAAGCAGCAAAGGTAGAAGTTGATGTGCTTCAGTTGCTTGGGAAGTATGACAGGATTGGCTGTCGCTGTGTTCAAATACGGAACTGGTTTGACTATCGCAACCATATCTGTATTGTATTTGAGATGCTTGGACCAAGCTTATATGATTTTCTTCGGAAGAACAATTATCGCCCATTTCCAGTTGATCTTGTCCGAGAGCTAGGCAGACAACTATTGGAATGTGTAGCATTTATGCATGATTTGCGTCTCATCCACACCGACTTGAAACCTGAGAACATACTTTTTGTTTCCCCAGAATACGTAAAAGTACCCGACTACAAGGTTACATCGAGGACACCAAAAGAGGGAATCTTTTATAAGAGACTGCCAAAGTCAAGTGCTATTAAGGTCATTGATTTTGGCAGCACAGCCTATGAGCACCAAGATCACAACTACATTGTCTCTACCAGGCATTATCGGGCACCTGAGGTTATTCTTGGACTTGGGTGGAGTTTCCCTTGCGACATATGGAGTGTTGGATGCATTTTGGTTGAGTTATGCTCGGGAGAGGCTTTGTTTCAAACGCATGAGAATTTAGAGCACCTAGCCATGATGGAGAGGGTTTTAGGCCCAATGCCTGTGCACATGTTGAAAAGAGCAGACCGGCATGCAGAGAAGTTCATCAGAAGGTGTAGACTGAACTGGCCAGAAGGGGCAGTCTCTCGAGAAAGTATCAAGGCCGTATTGAAACTACCTCGTCTTCCTAATCTAGTAATGCAGCATGTTGATCACTCTGCAGGGGATCTAATTGATCTCTTGCAAGGTCTTCTTCGCTTCGATCCCTCCAGTAGACTGACAGCTCATGAGGCGCTCCGGCATCCATTCTTCACAAAAGATCAATACCGGAGATTTTGA 1293 0.4462 MDYVTEFPHSHVDQRPRKRAKLAWEFPQTQSKAYSGMCYGQEVANMTSFGATRILPDHSGLFVKGLAEKGSPPWRDDDKDGHYMFALGDNLTPRYKILRKIGEGTFGQVLECWDREMRVLVAIKVVRSIKKYREAAKVEVDVLQLLGKYDRIGCRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVRELGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYVKVPDYKVTSRTPKEGIFYKRLPKSSAIKVIDFGSTAYEHQDHNYIVSTRHYRAPEVILGLGWSFPCDIWSVGCILVELCSGEALFQTHENLEHLAMMERVLGPMPVHMLKRADRHAEKFIRRCRLNWPEGAVSRESIKAVLKLPRLPNLVMQHVDHSAGDLIDLLQGLLRFDPSSRLTAHEALRHPFFTKDQYRRF 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi13g0154 430 PANTHER SERINE/THREONINE-PROTEIN KINASE DOA-RELATED 4 425 - -
Mibi13g0154 430 CDD PKc_CLK 82 422 - -
Mibi13g0154 430 ProSitePatterns Protein kinases ATP-binding region signature. 101 131 IPR017441 GO:0005524
Mibi13g0154 430 ProSiteProfiles Protein kinase domain profile. 95 422 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi13g0154 430 SMART serkin_6 95 422 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi13g0154 430 Gene3D Phosphorylase Kinase; domain 1 82 175 - -
Mibi13g0154 430 FunFam Serine/threonine-protein kinase AFC2 171 422 - -
Mibi13g0154 430 SUPERFAMILY Protein kinase-like (PK-like) 82 425 IPR011009 -
Mibi13g0154 430 ProSitePatterns Serine/Threonine protein kinases active-site signature. 216 228 IPR008271 GO:0004672|GO:0006468
Mibi13g0154 430 Pfam Protein kinase domain 95 422 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi13g0154 430 Gene3D Transferase(Phosphotransferase) domain 1 149 422 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi13g0154 Mibi-ChrMibi13 1747369 1751518 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi13g0154 80 424 MAP Kinase Gene Family AT3G59790 27.095 1.91e-27 111
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CLK Mibi13g0154 Pkinase 1.1e-48 CL0016