Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi13g0147 ATGGACAACGTTGGAGGAGGTTCGTCTTCGAACAATATTAACAACATAGGATTGAAGGAGCAAGAAAGGCTGTTGCCAATAGCAAATGTTGGCAGGATCATGAAGCAGATACTGCCTCAGAATGCCAAGATATCAAAGGAAGCGAAGGAGACCATGCAAGAATGCGTGTCGGAGTTCATAAGCTTCGTGACGAGTGAAGCGTCTGATAAGTGCAGGAAGGAGAGGAGGAAGACGGTGAATGGGGATGACATATGCTGGGCCTTGGCTGCGCTTGGTTTTGATGATTATGCTGAGCCATTAAGGAGGTATTTGCACAAATTTAGAGAGTTAGAAGTTGACAGAGCTAACCATGACAGAGGAAATAGCCCTCATGATAGGGATGATCTCTATCAGATTCCCTCCACAGGAATCAGGCAGTGA 420 0.4595 MDNVGGGSSSNNINNIGLKEQERLLPIANVGRIMKQILPQNAKISKEAKETMQECVSEFISFVTSEASDKCRKERRKTVNGDDICWALAALGFDDYAEPLRRYLHKFRELEVDRANHDRGNSPHDRDDLYQIPSTGIRQ 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi13g0147 139 MobiDBLite consensus disorder prediction 115 139 - -
Mibi13g0147 139 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 14 115 IPR027113 GO:0001228|GO:0006355|GO:0016602
Mibi13g0147 139 FunFam Nuclear transcription factor Y subunit B-3 13 134 - -
Mibi13g0147 139 PRINTS CCAAT-binding transcription factor subunit A signature 90 108 - -
Mibi13g0147 139 PRINTS CCAAT-binding transcription factor subunit A signature 52 70 - -
Mibi13g0147 139 PRINTS CCAAT-binding transcription factor subunit A signature 71 89 - -
Mibi13g0147 139 ProSitePatterns NF-YB/HAP3 subunit signature. 55 71 IPR003956 GO:0005634|GO:0006355|GO:0043565
Mibi13g0147 139 Gene3D Histone, subunit A 13 131 IPR009072 GO:0046982
Mibi13g0147 139 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 24 88 IPR003958 -
Mibi13g0147 139 SUPERFAMILY Histone-fold 21 125 IPR009072 GO:0046982
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi13g0147 Mibi-ChrMibi13 1697871 1698290 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi13g0147 18 128 CCAAT-HAP3 Transcription Factor Family AT2G47810 72.973 6.93e-58 175
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Mibi13g0147 CBFD_NFYB_HMF 1.3e-27 CL0012