Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi13g0119 ATGATGGGTAACAGCGACATGGACCCCGATTTCAACAAAGAAGAAGGCAAGAGCTACGTTCTCAGCGGCAGGATTATGCTAAGCGCCATCGTCATTTTATTCTTCATCGTCATCCTAATGATCTGCCTCCATCTCTACGTTCGTTGGTTTCACCTACAAGCTCGCCGCCGCCATCACAGCAGCCGCCGCCGCCGCCGCCCCCACATCGTATTCTACGACGACCCCACCACAAACGTAGTAGCCTCGTCACGTGGTCTCGATCAGTCTGTACTAATGTCTCTCCCTGTCTTTGTCTTCTCTTCCAAGACCCACCCCGATCAAATTGAATGCCCTGTCTGCTTGTCGGAGTTCGAAGATGGCGAAACGGGTCGTGTTTTACCCAAATGTAATCACAGTTTTCACGTTGACTGTATCGACATGTGGTTCAAGACACACTCTACATGTCCCAATTGCAGGGCTGCGGTTGAACCGGCACCGGGCGAGGTGAACCGGGCTGAAGTGGTTATAAATGTGAGTGAACCGGAGATCCCTGAAACAGAGTCGATTTCTGGGATGTGTTCGGAGTGTGAGCACGAAGGGAGGGATGAAAATGGAAGTAAAAACACGGTTTGTTGTTCGTCGTCTTCGATTGGGTTGGGGCGGAAGCCATTGTCACTTGTGGGTGTGACTTTGGAGGTGCCAAAGAGGAGTCTGAGCTTTGGGGACGAGTCGACTCGAGAGTCGCCGTTGAGGTCTCCGATGAGTCGCATGTTGTCCTTTAAGAGGATGCTTAGTAGAGACCGGAAAGCAAACCTTTCGCCATCGGCCGGGGACGGCGCCTCTGGGAATGACATGGAGAAGGATGGCGGCGGAGGAGGAGGCAATGAGGCTGACGTGGCGGCTTCGGGGAAAAGTCAAAGAGGGTAG 906 0.5309 MMGNSDMDPDFNKEEGKSYVLSGRIMLSAIVILFFIVILMICLHLYVRWFHLQARRRHHSSRRRRRPHIVFYDDPTTNVVASSRGLDQSVLMSLPVFVFSSKTHPDQIECPVCLSEFEDGETGRVLPKCNHSFHVDCIDMWFKTHSTCPNCRAAVEPAPGEVNRAEVVINVSEPEIPETESISGMCSECEHEGRDENGSKNTVCCSSSSIGLGRKPLSLVGVTLEVPKRSLSFGDESTRESPLRSPMSRMLSFKRMLSRDRKANLSPSAGDGASGNDMEKDGGGGGGNEADVAASGKSQRG 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi13g0119 301 SUPERFAMILY RING/U-box 90 162 - -
Mibi13g0119 301 SMART ring_2 110 151 IPR001841 -
Mibi13g0119 301 SMART FANCL_C_2 106 157 - -
Mibi13g0119 301 CDD RING-H2_EL5_like 109 152 - -
Mibi13g0119 301 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 72 158 IPR013083 -
Mibi13g0119 301 PANTHER E3 UBIQUITIN-PROTEIN LIGASE ATL42 26 180 - -
Mibi13g0119 301 FunFam RING-H2 finger protein ATL3 77 157 - -
Mibi13g0119 301 MobiDBLite consensus disorder prediction 254 301 - -
Mibi13g0119 301 Pfam Ring finger domain 109 152 IPR001841 -
Mibi13g0119 301 ProSiteProfiles Zinc finger RING-type profile. 110 152 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi13g0119 Mibi-ChrMibi13 1428670 1429575 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi13g0119 2 270 Rapid Response to Elicitors AT3G16720 51.712 2.90e-74 228