Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi13g0077 ATGCCTCATGCAAAATGCACGATGCCCAGGACCCAATTGGCGAATCTCATTTCCCAAACAGATCCCAACCCACAAATAATCCCTTCCACTTCCCTTGCTCCCTCCAAACCCACCATTTCCTCTATCCTCTCTGTCGAAACTCCCCCTGAAACCGTACAGCCCAGCCTCGACACAAGCAGCAAGAAGAAGAAGAAGACCGGTTTCTCCGCCTCAACCTTCAGAGGCTTCGGATGCTCTGCGGCCGCCGCCTCACACCAGCAGCGATTCAGTCCTGAGTCTTTTGGTGTTGTTGGATCCTATCGTCATGCTCCACTACCTTCCTCTCGTAACTTTGCTGGGGAAGAATTCGAGGCTGATGATGATTTGGGAAGGCTAAGTTGTAAACACGAGTATCACTTTCAGTGTTTAAGGCAATGGCTCGCTCAGAAAAATTCCTGCCCGGTGTGTAAGCAAGAAGTTGTGAGACGTCACTCCCACTCCGTGGCCAAATCCTAA 495 0.5091 MPHAKCTMPRTQLANLISQTDPNPQIIPSTSLAPSKPTISSILSVETPPETVQPSLDTSSKKKKKTGFSASTFRGFGCSAAAASHQQRFSPESFGVVGSYRHAPLPSSRNFAGEEFEADDDLGRLSCKHEYHFQCLRQWLAQKNSCPVCKQEVVRRHSHSVAKS 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi13g0077 164 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 112 159 IPR013083 -
Mibi13g0077 164 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF165 113 153 IPR045191 GO:0061630
Mibi13g0077 164 ProSiteProfiles Zinc finger RING-type profile. 125 150 IPR001841 -
Mibi13g0077 164 Pfam RING-H2 zinc finger domain 126 150 IPR024766 GO:0008270
Mibi13g0077 164 MobiDBLite consensus disorder prediction 42 56 - -
Mibi13g0077 164 MobiDBLite consensus disorder prediction 42 65 - -
Mibi13g0077 164 SUPERFAMILY RING/U-box 114 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi13g0077 Mibi-ChrMibi13 1048018 1050559 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi13g0077 114 155 C3H Transcription Factor Family AT2G15530 47.619 3.29e-11 58.9