Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi13g0072 ATGCTTAAAGAAGGGGACTCTGTGGCAATGACGCGGTTACATCAAAGCAAGTTAAAAAGCCACAGGTTACGTGATGAGAAACTCCGCAACGAAGAAGTTGAAAAGTTCATGAGTGAAGTTGCGGAGTTAACTTGTGTGAGTCATGAAAATATTGTCCAACTGTATGGCTGCGTCTCTTCCGAAAGCAGTGAACTACTTCTAGTGCAAGAATACATACCCAATGGAGATCTCAGGGAACGTCTTTGTGATTCGCGGCTGCAACGCGGTGCACTCCCCTGGAGTACCCGATTAAATATTGCAATACAAACGGCAAGTGCGCTGGCTTATCTCCATTCTCGTAATATTATACACCGTGACGTGAATACCAGCAATATTCTGCTTGACCACGATCTTAATGCTAAAGTTGCCGACTATGGATTGTCACACCCTTTCCTGCCTGGTGTTACCCACATGACAACTGATCCTGTAGGGACTCATGGTTATACCGATCCGGATTATTACCATTGTTGCCATCTTTCTGATAAGAGTGATGTATATAGCTATGGAGTTGTGCTGATGGAGCTGATATCATCCCTTCCAGCAGATTTTGAGGATGTTCAACCGTCTCTGCTTTCTAATTATGCTGTCAGTAAAATACGTGGTGGACAACTTGGAAGCCTTGTAGATCCTGCTCTTGGATTTGAATCAGACGACTGGATAACTCGAACAATTAGTGCAGTGGCACAGTTGGCATATATCTGTTTGCAAAGCCACAGAAGCCGTAGACCTTCCATGGCTGAAGTGCTGGTTAGGCTTAAGAGCATTGAAAGCACGAGAACCGGGTGTTCTCTTTCCTGTGCTCCTTCAGGTTTGTAA 855 0.448 MLKEGDSVAMTRLHQSKLKSHRLRDEKLRNEEVEKFMSEVAELTCVSHENIVQLYGCVSSESSELLLVQEYIPNGDLRERLCDSRLQRGALPWSTRLNIAIQTASALAYLHSRNIIHRDVNTSNILLDHDLNAKVADYGLSHPFLPGVTHMTTDPVGTHGYTDPDYYHCCHLSDKSDVYSYGVVLMELISSLPADFEDVQPSLLSNYAVSKIRGGQLGSLVDPALGFESDDWITRTISAVAQLAYICLQSHRSRRPSMAEVLVRLKSIESTRTGCSLSCAPSGL 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi13g0072 284 SUPERFAMILY Protein kinase-like (PK-like) 27 268 IPR011009 -
Mibi13g0072 284 Gene3D Transferase(Phosphotransferase) domain 1 76 276 - -
Mibi13g0072 284 Gene3D Phosphorylase Kinase; domain 1 2 75 - -
Mibi13g0072 284 Pfam Protein tyrosine and serine/threonine kinase 26 207 IPR001245 GO:0004672|GO:0006468
Mibi13g0072 284 PIRSF ILK 2 275 - -
Mibi13g0072 284 PRINTS Tyrosine kinase catalytic domain signature 176 198 IPR001245 GO:0004672|GO:0006468
Mibi13g0072 284 PRINTS Tyrosine kinase catalytic domain signature 69 82 IPR001245 GO:0004672|GO:0006468
Mibi13g0072 284 PRINTS Tyrosine kinase catalytic domain signature 109 127 IPR001245 GO:0004672|GO:0006468
Mibi13g0072 284 ProSiteProfiles Protein kinase domain profile. 1 268 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi13g0072 284 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 2 271 IPR044652 GO:0004672
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi13g0072 Mibi-ChrMibi13 1011611 1012465 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi13g0072 2 275 Receptor kinase-like Gene Family AT1G25390 46.209 4.85e-74 236
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Mibi13g0072 PK_Tyr_Ser-Thr 4.7e-38 CL0016