Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi13g0069 ATGCCGATATTCTCCTTCATATCTCAGTGTTTCGGCCCCAGTGCAAGTGAAAACGATAGTCAAATAGTGAGTGTGAATGTTGAGGTAACAAACAACCGCTGCAGCCCCTTCCAATCGGTGCCTGTGGTTTCTGAAGCACCGATCAACCATGTTCGATCTGAGGTTCTGAGTAGTCACGACAAAGGAAGTACGATATTAAAGTATTCTGAACTTAAATTAGCGACCAACAATTTTGATTCTGATAGAGAGCTTGGGAGAGGAAAACATGGGACAGTATATCTTGGAATTCTTAAAGATGGGCATTCTGTTGCAATAAAGCAATTACATGAAGACAAGTTAAAAGCCCACAGGTTACATGATGAGAAACTCCACAGTGAGAAAGTCGAAAAGTTCATGAGTGAAGTTCAGTTGTTAACTTCTGTGAGCCATGAAAACCTGGTCCAACTCTATGGCTGCATCTCTTCTCAAAGCAGTGAACTACTTCTAGTGCAAGAATACATGCCTAAAGGAGATCTTACTAAATGTCTTCTTGATTCGCTGCTGCAACCTGGGGCGCTCCCCTGGTGTACCCGATTAAAAATTGCAATACAAACAGCAAGTGCATTGGCTTATCTCCATTCTCATAGTATAATACATCGTGATGTGAAAACCAGCAACATTCTGCTTGACCACAATTTCAATGCTAAAGTTGCCGACTATGGGTTGTCACATGTTTTCCCACTAGGTTTTGTTACCCATATCACGACTGATCCTGAGGGGACTCCCGGTTATATTGATCCAGAGTATTATGAGCATTGCCATCTTTCTGATAAGAGTGACGTATATAGCTATGGAGTAGTGCTGATTGAGTTGATATCATCCCTGCCGGCATTTGGTGAGGATGATGAACTTCCCTGCCTTTCTGATTATGCTGTCAATAAAATCCGTGGGAGACAGCTTGGAAGTCTGGTGGATCGTGATCTTGGATTTGAATCAGACGACTGGATAACTCAAACTATTAGTGCAGTGGCAGAGTTGGCATGTAGCTGTTTGCAACCCCACAGAGACAGGAGACCTTCTATGGCTGAAGTGTTGGATAGGCTTAAGATCATTAAAAGTATGAGAATTTCCTCCAAATAG 1119 0.4245 MPIFSFISQCFGPSASENDSQIVSVNVEVTNNRCSPFQSVPVVSEAPINHVRSEVLSSHDKGSTILKYSELKLATNNFDSDRELGRGKHGTVYLGILKDGHSVAIKQLHEDKLKAHRLHDEKLHSEKVEKFMSEVQLLTSVSHENLVQLYGCISSQSSELLLVQEYMPKGDLTKCLLDSLLQPGALPWCTRLKIAIQTASALAYLHSHSIIHRDVKTSNILLDHNFNAKVADYGLSHVFPLGFVTHITTDPEGTPGYIDPEYYEHCHLSDKSDVYSYGVVLIELISSLPAFGEDDELPCLSDYAVNKIRGRQLGSLVDRDLGFESDDWITQTISAVAELACSCLQPHRDRRPSMAEVLDRLKIIKSMRISSK 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi13g0069 372 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 57 368 IPR044652 GO:0004672
Mibi13g0069 372 SMART serkin_6 78 364 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi13g0069 372 SUPERFAMILY Protein kinase-like (PK-like) 56 363 IPR011009 -
Mibi13g0069 372 ProSiteProfiles Protein kinase domain profile. 78 364 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi13g0069 372 Gene3D Phosphorylase Kinase; domain 1 42 166 - -
Mibi13g0069 372 Gene3D Transferase(Phosphotransferase) domain 1 167 371 - -
Mibi13g0069 372 Pfam Protein kinase domain 79 359 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi13g0069 372 ProSitePatterns Serine/Threonine protein kinases active-site signature. 210 222 IPR008271 GO:0004672|GO:0006468
Mibi13g0069 372 ProSitePatterns Protein kinases ATP-binding region signature. 84 106 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi13g0069 Mibi-ChrMibi13 998400 1000173 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi13g0069 65 366 Receptor kinase-like Gene Family AT1G25390 49.026 8.79e-91 283
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Mibi13g0069 Pkinase 4.2e-48 CL0016