Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi13g0068 ATGGCCATGGACGTCCAAATTCATTCTTATTCCCCCTTCCTTGCCCTCATAATAGTCGCCATCTCCTTGTTCTCTGCAGAATCACACAGCCATGGAGCAGCCACCACTTACTCTGCCTGCAATCAAACTTACAATTGTGGCAATATCAGCAACATCGCTTACCCTTTCTGGGGAAAGAATAGACCCCATTACTGTGGAGGTGGCAATCAATTCGAGCTCACTTGCCAAAATAATACAACTATCATCACGTTAGGCAAACAGAATTTCAAGGTGGTTTCCATTAACCCAGAATTTCACTCCATGAGACTGCTACAAACTGCTCTCTCTGTTTCTTGTCCTTGGGATTTCACAAACACTTCCTTGGATCCTTCTCTGTTTCGCTACGATAACTTGACAATTCAGGACTTGTCTGTATTCTACAAGTGCCCATCTCATGTTTCTAGCAAAAGCAACATCACTTGCAAAAAAGATGTTGCCTTTTTCGCCAAGCAAGATGAGACGCAGAAACTGCAAGAATTTTCTGAATGTAAGGTTCATAATCAAATTCTAGTTCAAGGTGAGATTCCAGAAGTTGAATACATGGATGAGCTGAACAGATCTGTAAGGAATGGTTTTGTTGTTCAATATGTGGGAAATTGGGTTCCCTGCTTGGCATGCAATTCATCGGGAGGAATATGTGGGACTGACATCCATGATGCTTCAAGATTTGCTTGTTATTGTAGGAACAGAGTTCGTCCCTATTCATGTCCAAAGAAAAGAGGTTGGAACTGGAAAGGGAAACTCATAGCAGGTGCTGCTGCTTCTTCATTCAGCGTCATAGTTATGATCATTGGCTTTTATTTCTATCTGCGCCGAAAAAAGAAGAATCCTTATGCCAAATCTGACAAACATTCTCAGATTCGGACCATATCTTCTGGTTCCTCTGTAAAAGATGCTGAGAAAGAAAGTAAATACTTTGGAGTCCACCTCTTCTCATATACCGAACTTGAAGAGGCCACTAACAACTTCGATTCGGCCAATGAACTCGGAGATGGAGGTTTTGGAACAGTTTATTGTGGAAAACTAGGGGATGGTCGTACAGTTGCAGTGAAGAGATTGTATGAAAACAATGAGAAGAGAGTAGAGCAATTCATGAATGAAGTGGAGATCTTAACTCGTTTGCGCCACCAAAACCTTGTCCAACTTTATGGCTGCACTTCTCGCCACAGCCGTGAACTCCTCCTTGTTTATGAATACGTCCCTAATGGAACTCTCGCCGATCATCTTCATGGCCAAAAAGCAGAATTAGCAAACACACTCCTCCCCTGGCATACCAGAATGAATATAGCCATAGAAACTGCAAATGCACTTGCATATCTTCACGCATCTGACATCATCCACCGTGACATAAAAACCACTAACATCCTTCTTCACAATCATTTCGTTGTCAAAGTTGCAGATTTTGGACTATGTCGTTTGTTTCCTAATGATGTCACTCACATTTCAACCGCTCCACAGGGAACTCCTGGATATGTGGATCCAGAGTACCATCAGTGTTACCAGCTTACTGATAAGAGTGATGTGTACAGTTTTGGGGTTGTGCTTATTGAGTTGATATCATCAATGCCTGCTATTGATATCACGAGGCATCGGAATGAGGTGAATTTGGCGAACATGGCTATCAACAAGATTCAAAATGGGGATTTGCATGAGATTGTGGACCCAAGTCTTGGGTTTGAAGAAGATTTTATGGTGAGGAAGATGATAGGTGGAGTGGCAGAGTTGGCATTCCAGTGCTTGCAGTGTGTGAAAGATACGAGGCCTTCCATGGAAGAGGTAGCGGAGAGGTTGAAGGAAATACAGAGGGAAGGGATAGGGAAAACGAAAGGAGAAGAGGAGATGGATGTGATATCAGCAGATCATGTGGTGTTGCTGAAGAATGAAGTGCCCCCACTATCACCTGATTCAAATATGAGGAGCACAGGGACGACCTCAAATGCTAGCGGATAA 1989 0.4299 MAMDVQIHSYSPFLALIIVAISLFSAESHSHGAATTYSACNQTYNCGNISNIAYPFWGKNRPHYCGGGNQFELTCQNNTTIITLGKQNFKVVSINPEFHSMRLLQTALSVSCPWDFTNTSLDPSLFRYDNLTIQDLSVFYKCPSHVSSKSNITCKKDVAFFAKQDETQKLQEFSECKVHNQILVQGEIPEVEYMDELNRSVRNGFVVQYVGNWVPCLACNSSGGICGTDIHDASRFACYCRNRVRPYSCPKKRGWNWKGKLIAGAAASSFSVIVMIIGFYFYLRRKKKNPYAKSDKHSQIRTISSGSSVKDAEKESKYFGVHLFSYTELEEATNNFDSANELGDGGFGTVYCGKLGDGRTVAVKRLYENNEKRVEQFMNEVEILTRLRHQNLVQLYGCTSRHSRELLLVYEYVPNGTLADHLHGQKAELANTLLPWHTRMNIAIETANALAYLHASDIIHRDIKTTNILLHNHFVVKVADFGLCRLFPNDVTHISTAPQGTPGYVDPEYHQCYQLTDKSDVYSFGVVLIELISSMPAIDITRHRNEVNLANMAINKIQNGDLHEIVDPSLGFEEDFMVRKMIGGVAELAFQCLQCVKDTRPSMEEVAERLKEIQREGIGKTKGEEEMDVISADHVVLLKNEVPPLSPDSNMRSTGTTSNASG 662
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi13g0068 662 ProSitePatterns Protein kinases ATP-binding region signature. 342 364 IPR017441 GO:0005524
Mibi13g0068 662 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 15 659 IPR044652 GO:0004672
Mibi13g0068 662 ProSitePatterns Serine/Threonine protein kinases active-site signature. 458 470 IPR008271 GO:0004672|GO:0006468
Mibi13g0068 662 MobiDBLite consensus disorder prediction 646 662 - -
Mibi13g0068 662 CDD STKc_IRAK 342 613 - -
Mibi13g0068 662 Pfam Wall-associated receptor kinase C-terminal 163 242 IPR032872 -
Mibi13g0068 662 FunFam WAK1-OsWAK receptor-like cytoplasmic kinase (OsWAK-RLCK) 308 412 - -
Mibi13g0068 662 Coils Coil 367 387 - -
Mibi13g0068 662 Gene3D Phosphorylase Kinase; domain 1 307 412 - -
Mibi13g0068 662 Pfam Protein kinase domain 338 607 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi13g0068 662 MobiDBLite consensus disorder prediction 641 662 - -
Mibi13g0068 662 ProSiteProfiles Protein kinase domain profile. 336 613 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi13g0068 662 Pfam Wall-associated receptor kinase galacturonan-binding 40 103 IPR025287 GO:0030247
Mibi13g0068 662 SMART serkin_6 336 611 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi13g0068 662 SUPERFAMILY Protein kinase-like (PK-like) 316 610 IPR011009 -
Mibi13g0068 662 Gene3D Transferase(Phosphotransferase) domain 1 413 635 - -
Mibi13g0068 662 FunFam Wall-associated receptor kinase-like 20 413 623 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi13g0068 Mibi-ChrMibi13 991183 996440 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi13g0068 34 662 Receptor kinase-like Gene Family AT1G25390 43.012 1.39e-145 436
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Mibi13g0068 Pkinase 4.4e-49 CL0016