Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi13g0064 ATGGCAGCGTTTTCCAATTTTACCAAGAAGCTCCATACCTGGCAGTGCTGTGAAAGGGAGTCCCCTATCTTGATTTTCTTATTCTTTCATAAGGCCATTCGAAATGAGCTTCATGCTCTTCACCGTTCAGCTTTGGCATTTGCCTCCGCCAACCGCTCTGATATCCAGCCCCTCTTCCACCGCTATCATTTCCTTCGATCCATTTACACACACCACTCCCTTGCTGAAGATGAGGTGATTTTTCCTGCTCTTGATATACGTGTGAAGAATGTGGCCCACACATATTCTCTTGAACACAAAGGCGAAAGCAATCTCTTTGATCATCTTTTTGGCCTGCTAAATTCTACCTTCCAAAACGATGCAAGTTTTTCAAAGGAGTTTGCATCTTGCATGGGAGCTCTGCAGATATCAATTAATCAACACATGGCTAAGGAAGAGGAGCAGGTATTTCCACTGATTATCGAGAAATTCTCAATAGACGAACAAGCATCTCTAGTTTGGCAGTTTCTGTGCAGCATTCCTGTCAATACAATGACAGAATTTCTTCCCTGGCTCTCAACATCCATATCATCAGATGAATCTAGTGATCTGCTGAAGTGTTTAAGCAAGATAGTACCAGATGAAAAGCTTCTTCAAAAGGTTATTTTCGCTTGGATGGAAGGTAGAAGTGGTGTCAATACAGTTGAAAGTTGTGCACATCATTCTCATATTCAGTGTAGTTCTAGCCCGTTAACCCATTTAATTGGGAAAGCAAACCGTGCTTGTGAGTCTGCAAATACTGGAAAAAGAAAACATTCTGAATCTTTTCTAGATGTTTCTGATGCCACTGGAACTCGTCCTATTGATGAAATATTGCTCTGGCATAATGCGATAGAAAAAGAGTTGAGTGAGATAGCGGTGGAGACCAGAAATCTACAACTTTCTGGAAATTTTACTAATTTGTCAGATTTTAATGAAAGGTTGCAGTTTATTGCTGATGTTTGTGTATTTCACAGTATTGCTGAGGACAAGGTTATATTTCCTTCTGTAGATGGAGAACTTTCTTTCTTTCTGGAGCATGCTGAAGAAGAAAGCCAATTTAATGACTTTCGGTGCTTGATTGAAGGAGCAACATCCAATTCAGATACTGAATTTTATTCCAGGTTATGCTCATATGCTGATCATTTAATGGAAACCATACAGAGGCATTTCCGCAATGAAGAAGTTCAGGTTCTTCCGCTTGCTCGGAAGCATTTCAGCTTCAAAAAACAACGTGAACTTTTGTACCAAAGCTTGTGTATGATGCCTCTGAAATTGATTGAACGTGTCCTGCCCTGGTTGGTGGGATCATTAACTGAAGATGAAGCAAAGATGTTTTCGAAAAACATGCAACTAGCAGCTCCTCCAACAGATTCTGCTTTAGTCACACTCTTCTGTGGTTGGGTTTGCAAGGCTCGTAAGGGGGCTATGTGCTTGTCTTCAAGTGTATCAGGTTGCTGCCCTGCTAAAAATCTTACTGATATAGAAGAAAATGGTGTCCAGTCATCATGTGTCTGTGCTTCTGCATTATCTGTTGATGGTTGCTCAGTGTCAGCTGAAGATGAGAACAGAAGACCAGTCAAGCGAAACATATTGGACTTCTGCAAGAATGGAGATGTCCCTCAAATTTCAGAAACTGAAAGCATCCAAAAACAATGTTGCAGTGCCCAGTCTTGTTGTGTGCCTGGTTTAGGAGTGAGTAGTAATAATCTGGGACTGAGTTCTCATTCTACTACCAAGTCCTTGCGCTCCTTATCTTTCAACTCTTCTCCCCCATCTCTTAATTCCAGTCTATTCATATGGGAAACAGATAACAACTCCTGTGATGCTAGCTCTTTAGAAAGACCGATCGATACTATATTTAAATTCCATAAAGCTATACGCAAAGACTTGGAATATTTAGATGTTGAATCTGGAAAGCTTAGTTATGGTGATGAGACAATTCTTCGTCACTTTGCTGGAAGATTTCGCCTTTTATGGGGTTTACAGAGAGCTCACAGTAACGCTGAAGATGACATAATTTTCCCAGCATTGGAATCCAAAGAGGCACTTCATAATGTGAGTCATTCATACACACTGGATCATAGGCAGGAAGAAAAATTATTCGAGGATATGTCCTGTGTTCTTTCTGAGCTTTCTGTTCTTCATGAAAGTTTTCTGACTCTCAATATGTCAGAAGATACAAGTAATTTGGAAACTTCAGATGCCACTGTGAGTGATAACATAGTTAAGTATAGTAAGTTAGCAACTAAACTTCAAGGGATGTGCAAATCCATTCGAGTGACCCTGGATCAACATATGTTTAGAGAAGAGCGTGAACTTTGGCCATTGTTTGGGAGACATTTCACTGTGGAAGAACAAAACAAGATAGTTGGCCGGATAATTGGAACTACTGGTGCTGAAGTACTACAGTCAATGTTACCCTGGATAACTTCCGCACTGACTCAGGAAGAACAGAACAAAATTATGGACACATGGAAGCAGACCACTAAGAACACCATGTTCAATGAATGGCTTAATGAATGCTGGAAAGAGAGTTCCTCGCCTATCCATCAGACTGAAACATCAGAGCATAGCACGTCCCAAAGAGGTTCTGGATATCAAGAAAGCTTGGACCTGAATGATCGGATTTTTAAACCAGGTTGGAAATATATATTTCGGATGAATCAGAGCGAGCTTGAGTCAGAGATACGGAAGGTTTATCGGGATTCTACTCTTGACCCAAGGAGAAAAGCATATCTTGTTCAAAATCTAATGACCAGTCGCTGGATTGCTTCCCAGCAGAAGTTACACAAAGCTGTCACCGGAGAATCTTCTACTAGTGAAGAAATTGAAGGAAAATCCCCATCATTTCGGGACCTGGGGAAAAATGAATTTGGATGTGAGCATTATAAGAGAAACTGCAAACTTCGAGCTGCATGTTGTGGTAAGTTATTCACATGCAGATTTTGTCACGACAATGTGAGTGATCACTCAATGGATAGAAAAGCAACATCAGAAATGATGTGCATGCGCTGCTTGAATATACAAGTAATTGGGCCCACATGCATGACCCCTTCATGTGATGGACTTTCAATGGCAAAATATTATTGCAGCATCTGCAGATTTTTTGATGATGAAAGAAATGTATATCATTGCCCATACTGCAATGTATGCCGTGTTGGGAGAGGGCTTGGAATTGATTATTTTCATTGTATGAAATGCAATTGTTGTCTGGGGATTAAATCAGCATCTCACAAATGCTTGGAGAAAAGTTTGGAAATGAATTGTCCAATTTGTTGTGACTTCTTATTCACATCCACTGCTACAGTCAGAGCTTTACCTTGTGGCCATTATATGCATTCAGCTTGCTTTCAGGAATACACTTGTTGTCACTATACATGTCCAATTTGCAGCAAGTCCTTGGGAGATATGGCGGTTTACTTTGGTATGCTTGATGCTTTGTTGGCTGCTGAGGTGCTTCCGGAAGAGTACAAGGACCGGTATCAGGATATACTGTGCAATGATTGTGATCGAAAGGGCTCTTCACGGTTCCACTGGTTATACCACAAATGTGGATTTTGTGGCTCATACAATACCCGTGTGATCAAGTCTGAGGCAAATTCCATCTGCCACTAG 3636 0.4084 MAAFSNFTKKLHTWQCCERESPILIFLFFHKAIRNELHALHRSALAFASANRSDIQPLFHRYHFLRSIYTHHSLAEDEVIFPALDIRVKNVAHTYSLEHKGESNLFDHLFGLLNSTFQNDASFSKEFASCMGALQISINQHMAKEEEQVFPLIIEKFSIDEQASLVWQFLCSIPVNTMTEFLPWLSTSISSDESSDLLKCLSKIVPDEKLLQKVIFAWMEGRSGVNTVESCAHHSHIQCSSSPLTHLIGKANRACESANTGKRKHSESFLDVSDATGTRPIDEILLWHNAIEKELSEIAVETRNLQLSGNFTNLSDFNERLQFIADVCVFHSIAEDKVIFPSVDGELSFFLEHAEEESQFNDFRCLIEGATSNSDTEFYSRLCSYADHLMETIQRHFRNEEVQVLPLARKHFSFKKQRELLYQSLCMMPLKLIERVLPWLVGSLTEDEAKMFSKNMQLAAPPTDSALVTLFCGWVCKARKGAMCLSSSVSGCCPAKNLTDIEENGVQSSCVCASALSVDGCSVSAEDENRRPVKRNILDFCKNGDVPQISETESIQKQCCSAQSCCVPGLGVSSNNLGLSSHSTTKSLRSLSFNSSPPSLNSSLFIWETDNNSCDASSLERPIDTIFKFHKAIRKDLEYLDVESGKLSYGDETILRHFAGRFRLLWGLQRAHSNAEDDIIFPALESKEALHNVSHSYTLDHRQEEKLFEDMSCVLSELSVLHESFLTLNMSEDTSNLETSDATVSDNIVKYSKLATKLQGMCKSIRVTLDQHMFREERELWPLFGRHFTVEEQNKIVGRIIGTTGAEVLQSMLPWITSALTQEEQNKIMDTWKQTTKNTMFNEWLNECWKESSSPIHQTETSEHSTSQRGSGYQESLDLNDRIFKPGWKYIFRMNQSELESEIRKVYRDSTLDPRRKAYLVQNLMTSRWIASQQKLHKAVTGESSTSEEIEGKSPSFRDLGKNEFGCEHYKRNCKLRAACCGKLFTCRFCHDNVSDHSMDRKATSEMMCMRCLNIQVIGPTCMTPSCDGLSMAKYYCSICRFFDDERNVYHCPYCNVCRVGRGLGIDYFHCMKCNCCLGIKSASHKCLEKSLEMNCPICCDFLFTSTATVRALPCGHYMHSACFQEYTCCHYTCPICSKSLGDMAVYFGMLDALLAAEVLPEEYKDRYQDILCNDCDRKGSSRFHWLYHKCGFCGSYNTRVIKSEANSICH 1211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi13g0064 1211 SUPERFAMILY RING/U-box 1093 1148 - -
Mibi13g0064 1211 SMART ring_2 1096 1137 IPR001841 -
Mibi13g0064 1211 FunFam Zinc finger protein-related isoform 1 1091 1140 - -
Mibi13g0064 1211 Pfam Hemerythrin HHE cation binding domain 622 783 IPR012312 -
Mibi13g0064 1211 Pfam Hemerythrin HHE cation binding domain 27 153 IPR012312 -
Mibi13g0064 1211 Gene3D - 1167 1209 - -
Mibi13g0064 1211 ProSiteProfiles Zinc finger CHY-type profile. 960 1029 IPR008913 GO:0008270
Mibi13g0064 1211 ProSiteProfiles Zinc finger RING-type profile. 1096 1138 IPR001841 -
Mibi13g0064 1211 CDD RING-H2_Pirh2 1095 1138 - -
Mibi13g0064 1211 ProSiteProfiles Zinc finger CTCHY-type profile. 1032 1095 IPR017921 -
Mibi13g0064 1211 PANTHER RING FINGER AND CHY ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 665 1205 - -
Mibi13g0064 1211 Pfam Zinc-ribbon 1143 1200 IPR039512 -
Mibi13g0064 1211 Gene3D nmb1532 protein domain like 618 878 - -
Mibi13g0064 1211 Pfam CHY zinc finger 967 1042 IPR008913 GO:0008270
Mibi13g0064 1211 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1089 1140 IPR013083 -
Mibi13g0064 1211 CDD Hr-like 282 406 - -
Mibi13g0064 1211 CDD Hr-like 624 782 - -
Mibi13g0064 1211 CDD Hr-like 25 151 - -
Mibi13g0064 1211 FunFam Zinc finger protein BRUTUS 617 847 - -
Mibi13g0064 1211 Gene3D nmb1532 protein domain like 21 171 - -
Mibi13g0064 1211 Gene3D nmb1532 protein domain like 282 424 - -
Mibi13g0064 1211 SUPERFAMILY Zinc hairpin stack 1033 1089 IPR037275 -
Mibi13g0064 1211 SUPERFAMILY CHY zinc finger-like 962 1023 IPR037274 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi13g0064 Mibi-ChrMibi13 941114 947890 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi13g0064 18 1205 C2H2 Transcription Factor Family AT3G18290 65.225 0.0 1592