Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi13g0062 ATGAATTGCATAAAAGTAAATGCAGAAGAGCAGTACTGGAAAGCGCATACATTTTGGGAGAAGCCAATTAGCATTCTGAAATTCCATGTACAGGAGCGGAATAAACGTATTGAGGTTGCTATTGGTGAATACGCTGTGGAATTTGTGTTCTTTATACAATCTATGAGTTTTGTGTCTAGATTATGCCCCTGCTTCAACAAGAGGTCCAAGGCCGAAGCAGCCTCTGATTCCCATCATCATCATCGAGCACCTAACGATGTTGCCAGCATGTGGGATCTTTTCTTCGACCTCCACTCTCTGCAGCTAGCAACTAACTTCTTCTCCGAGTTGAACCAATTAGGTCATGGAGGATTTGGTCCTGTTTACAAGGGATTGATGCCAAATGGTCAAGAAATAGCTGTGAAGAAGCTGTCTATGGAATCAAGACAAGGAAATAAAGAATTTACCAATGAGGTCAAACTGTTGCTTAGAATTCAGCACAAGAACTTGGTTACATTATATGGGTGTTGTGCTGAAGGACCTGAGAAGATGCTTGTTTATGAGTATCTTCCAAACAAGAGTCTTGATCACTTTCTCTTTGATAAAAGAAAGTCGCCATCTCTAGACTGGGCAACACGATTTAGAATAGTTACAGGTGTGGCAAGAGGACTTCTGTACCTGCATGAAGAGGCCCCTATAAGAATCATTCATAGAGACATAAAAGCCAGTAACATTTTGCTGGACGAGAAGTTGAACGCAAAAATTTCAGATTTTGGTTTGGCAAGGCTATTTCCTGAGAATGACACTCATATGCAAACATTTAAGATTTCTGGTACACATGGTTACATGGCTCCAGAATATGCAATGCGTGGATATTTGTCTGTGAAGACGGATGTTTTTAGTTATGGAGTCTTGGTATTAGAAATTGTTAGTGGGAGAAAAAATCATGACCGGCTACTTGGAGAAGAGGAGGCAGATCTGTTGAACAATGCATGGAAGCTATATCAGGCGGGAAAGATATTGGATTTGATTGACACAAGCCTAGCCAGATACAATGGTGACGAGGCAGCGATGTGCATTCAGCTGGGTTTGTTGTGCTGCCAAGCAAGCATATCAGAAAGACCTGATATGAATGCTGTTCATCTGATGCTCTCAAGTGACTCGTTCACTTTGCCTAGACCTGGTAAACCCGGAATTCAAGGCCGCGTAGGACGTTGGACTACGACCTCATCCTCTGCTTTCACCCATACTAATGCTACTAGTGCAACCAAGGCTTCTGGGGGAAGTAGTATAGTAGAGGACTATTCTAGAAATTCTATTTCCACTTCTTCGTTTGATGAAGGAAGATGA 1329 0.4206 MNCIKVNAEEQYWKAHTFWEKPISILKFHVQERNKRIEVAIGEYAVEFVFFIQSMSFVSRLCPCFNKRSKAEAASDSHHHHRAPNDVASMWDLFFDLHSLQLATNFFSELNQLGHGGFGPVYKGLMPNGQEIAVKKLSMESRQGNKEFTNEVKLLLRIQHKNLVTLYGCCAEGPEKMLVYEYLPNKSLDHFLFDKRKSPSLDWATRFRIVTGVARGLLYLHEEAPIRIIHRDIKASNILLDEKLNAKISDFGLARLFPENDTHMQTFKISGTHGYMAPEYAMRGYLSVKTDVFSYGVLVLEIVSGRKNHDRLLGEEEADLLNNAWKLYQAGKILDLIDTSLARYNGDEAAMCIQLGLLCCQASISERPDMNAVHLMLSSDSFTLPRPGKPGIQGRVGRWTTTSSSAFTHTNATSATKASGGSSIVEDYSRNSISTSSFDEGR 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi13g0062 442 ProSitePatterns Serine/Threonine protein kinases active-site signature. 228 240 IPR008271 GO:0004672|GO:0006468
Mibi13g0062 442 FunFam Cysteine-rich receptor-like protein kinase 41 183 383 - -
Mibi13g0062 442 Pfam Protein tyrosine and serine/threonine kinase 111 337 IPR001245 GO:0004672|GO:0006468
Mibi13g0062 442 SUPERFAMILY Protein kinase-like (PK-like) 87 377 IPR011009 -
Mibi13g0062 442 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 53 413 - -
Mibi13g0062 442 SMART serkin_6 107 382 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi13g0062 442 Gene3D Phosphorylase Kinase; domain 1 67 182 - -
Mibi13g0062 442 CDD STKc_IRAK 113 377 - -
Mibi13g0062 442 FunFam Cysteine-rich receptor-like protein kinase 2 73 182 - -
Mibi13g0062 442 Gene3D Transferase(Phosphotransferase) domain 1 183 383 - -
Mibi13g0062 442 ProSiteProfiles Protein kinase domain profile. 107 377 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi13g0062 Mibi-ChrMibi13 922571 924998 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi13g0062 83 392 Receptor kinase-like Gene Family AT4G21410 52.866 6.20e-109 334
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mibi13g0062 PK_Tyr_Ser-Thr 9.2e-48 CL0016