Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi13g0059 ATGGCTGAGTTCACCACATATTTGCAACCCCTTAGATCATCTTTTCATTTCATAGATATTGATCCAAGCATGGAACCAATAAACCAATTCACAGAGATGAGTGTCTTTGAAAACTCAAATCCTAATTTTCAGAGCTTGATGCCTTTCTCCTGTGACACCTCCTTGGGCTTCCCTGAGCCTCAACTTGAAAGAAAATTGGAGGAAAGCTTTCTTAGCCTTGTCCATCAGTTCAATCACAATGCTTTACCAGTTTCTTCTCCCAATTTTCCTGAGGAGAATGAAATCCATGAAAGTAAAAAGAGGAAGCCAACAGATGTGCTAGAGTCCAGTTCCATAAATTCAACTTCTTCAGTTTTTGAGAGTGGAAGCAAAATAAAGAATGTAACGTTTCATTTTTTTCTTCCACGTTTTCAGAGTTCCAGCAGAAGTAAGAGAGTAAAAAGCAATGAAGCAGATGTAAACAATTCAAAAGACGTGGTTCATGTCAGAGCCAAAAGAGGTCAAGCTACTGATAGTCACAGTTTAGCAGAAAGGGTTAGAAGAGGGAAAATCAATGAGAAGTTAAAATGCTTACAGAATATTGTCCCAGGATGCTGCAAGACTATGGGCATGGCAGTTATGCTGGATGAGATCATAAACTATGTTCAATCCTTGCAGCATCAAGTGGAGCTTACTGCAGCAAGCAACTTCTATGACTTCAACTCAGATACAGATGCTTTGGAAACATTGCAGAGAGCAATGGCAGCTGAGGCAAAAGAGTTATCCAAACATGGGAGAGAAGACTGCCTAGGAATTTCTTGTTTTCAACCAACCTGGCCCTTCTGA 825 0.4012 MAEFTTYLQPLRSSFHFIDIDPSMEPINQFTEMSVFENSNPNFQSLMPFSCDTSLGFPEPQLERKLEESFLSLVHQFNHNALPVSSPNFPEENEIHESKKRKPTDVLESSSINSTSSVFESGSKIKNVTFHFFLPRFQSSSRSKRVKSNEADVNNSKDVVHVRAKRGQATDSHSLAERVRRGKINEKLKCLQNIVPGCCKTMGMAVMLDEIINYVQSLQHQVELTAASNFYDFNSDTDALETLQRAMAAEAKELSKHGREDCLGISCFQPTWPF 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi13g0059 274 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 168 218 IPR011598 GO:0046983
Mibi13g0059 274 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 85 241 IPR024097 GO:0006355
Mibi13g0059 274 SMART finulus 174 224 IPR011598 GO:0046983
Mibi13g0059 274 Pfam Helix-loop-helix DNA-binding domain 172 219 IPR011598 GO:0046983
Mibi13g0059 274 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 166 227 IPR036638 GO:0046983
Mibi13g0059 274 Gene3D - 164 229 IPR036638 GO:0046983
Mibi13g0059 274 MobiDBLite consensus disorder prediction 92 106 - -
Mibi13g0059 274 MobiDBLite consensus disorder prediction 83 108 - -
Mibi13g0059 274 Coils Coil 240 260 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi13g0059 Mibi-ChrMibi13 913286 914898 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi13g0059 11 272 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G73830 45.255 2.51e-50 164
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mibi13g0059 HLH 1.8e-05 No_clan