Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi13g0044 ATGCACACGTGGGAGCCCATGATATCGACACGTCATCATGTGACCTGGATCTTTGGGCTTTGCCACGTCGGTCAAAACAAGCCCTGCAAGTATGAACGCAAACTCTGGACTCTGATTTCATCTTTTCTCTCTTCCCTCTCCTTTCCTGCTGGAAGCTCTGCTTCTAACTTGTTCCTCCTCCCCAAAAAAGAAACATTTCTTTTGAAACAAATCAACCCACAAAATTTGCTCCCGCATAATTTGCTCTTAAACTCATTTATTGTACGCGTTTTTCGATCCCTCGCCTCTTATTTGTTGCCCGCATACTCTTTGCTTAGTTGTTCGGACTCCATGCGAATTTTCGTAGTAAAAATTAAGACTGGTGTTTCTTGTGCTATTATTGCTGCCTCATGGCTGAAACCAGGAAATCTTGCTGAGATACACCGAGAAGCAAAGCACCGTTGGTTTCGACCTCTGGAAATCTACGAAATACTTCGCAATTATCAAACCTTTGAGTTGACACGAATTCCACCTACTAAACCTCCAGCTGGATCACTGTTGTTGTTCGATCGAAAAGTAGTTCGCCACTTTCGCAGAGATGGTTACGTATGGAGGAAGAAAAAAGACGTGAATACTGTGAGCGAATCTCATGAAAAGTTGAAGGTTAGCAGCGTGGATGTTCTACAATGTTACTATGCTCATAAAGAAGATAATAAGAACTTTCAACGGCGAAGTTATTGGATGCTTGATGAAGACTTAGAGCACATTGTCCTTGTTCACTACCTAGAAGTTAAAGAGGGGCACAAGGCTGCCATTTCAGATTTTCATGCTGGTCCAGTACCTTTGGTTGGTAGCCCTATGAGTAGTTCTGCACAAGTTCGTTCGCCTATTTCTTTAGTTCAAAAACCTTATGTATCAAGCACAAATAGAGTTGATTGTTATGGAAGAGCATTATCTTCTGATTACGAGGATATTGACTCTTCAATTGGTCAACAAGCCACTTTGCATGCTCAACCCCTCAGCAGTCCCCTCCGTCAAAGCTGGCCTTTGTTCACACATGCAACTACTGGTTTTTCTCAGTTGCCGAGGATCCCAAGTAATTCATGGTCATCATCTCTTCCTAACTCTTATCCTGCATCTTTGGCACCTTCATGGCCATTAAGTCAAAACTCTACCAGACACACAATTAGTAAACATGATGGAAATCTTCATGTTGAAGGATCTGATAAAGGCTTCCTAGCTGATTCTTTTGTCCATAATCTAAGGGATGCAATGTTTGATCCAGATAGTGCTATGCTAAATGATGTGACCCGTGGAAATAGGCTGATTAATGACATGAACTTCCAGTCAGTTATAGGAGTATCCAAGTCAGTAAATCAGGTACAAAAAGAGGATGATTTAAATTCAGATTGTACCCAATTTAATGATCCTTCTGATCACCCTGTTCCTGAATCTTCAACTGTTATAGTAGACCAGCAACTTAACAATGAAAATGCATACAATGGTGAACTAGAACAGTTTGAATCTGGGGAGCTGAAGAAACTCGACAGTTTTGGAAGGTGGATGGATATGGAAATTGGTGGAGACTTTGATGAATGTTTGATGGCTTCAGATTTTGGCGACTATTGGGATATGGAAGTGGCCAGTTTACATATGCAGTTGGATGTGAATTCATTGGGTCCTTCCCTTTCTCAAGAACAACTATTTAGCATCCTTGATTTTTCTCCAGATTGGGTATTTTCTGGGTCCAGAACAAAGGTCAAGGAAATTTCTACTGAGACAAAGTGGGGATGCATGTTTGGTGAAATTGAGGTTTCTGCTAAAGTGTTGACTGATAATGTCATATGTTGTCAGGCTCCTTTTCATTCACCTGGTCGAGTCCCATTCTACATTACTTGTAGTAATAGGTTGGCTTGCAGTGAGATACATGAAGAAGGTAAAGGACCGAATGTGTTGGATGATGAAGGCAAAGGAGTAATTCATTTGGTAGCTGCTCTTGGTTATGCATGGGCTGTAGGCCCCTTAGTTGCTGCTGGTGTCAATCCTAACTTTAGAGATGCCCGTGGAAGAACAGGGCTTCACTGGGCATCTTATTTTGGAAGAGAGGAAACTGTCATCGCTCTAATCAAATTAGGTGCAGCGCCAGGTGCTGTTGAGGATCCAACATCAACATTTCCTCAAGGACGAACTGCTGCAGATTTAGCTTCAAGCAGAGGACATAAAGGCATTGCAGCATATCTGGCTGAGGCAGATCTTACAAGTCACTTATTGGTTGTCAATGAAAATGAGATAGACACCACTGCTGCAGCCAAAGCAGGTGACAATGCTTTTGAGATTGCTCAAGCTGACTCCTCCAACATGGCAATGGACGAGCAATACTTTTTAAAGGAGGCACTCGCAGTTCTGCAAAAATCTGCTCGTGCAGCTGCATCAATTCAAGCTGCTTTTAAAGCAAGATCATTCCATCAGAGACAGTTGATTAGTCATGGTAGTAGTGATATAGATGAAATAGCACTAAACCTAGCTGCAGTTGTTGGTTCCTTGAACAAAGTTCAGAAAATGAGTCACTTTGAAGATCATCTTAATCATGCAGCTTTAAAGATCCAAAAGAGATATCGGGGGTGGAAGGGGAGGAAAGAATTTTTGAAGATATGCAACCGTATTGTAAAAATACAGGCCCATATTAGAGGACGCCAAGCTCGTAAACAGTACAAACGGTTTCTTTGGTCTGTTGGCATTGTGGAGAAGATAATACTGCGTTGGAGGCGTAAAGGAGCTGGTCTACGAGGATTCCGAGTTGAGCAGCCATATGGAATTATGGCTTCAAATGTGGACGAGAATGATGAATATGAATTTCTGAGCATTGCACGAAAACAAAAATATGATGATGTTAGTAAGGCTTTAGCTAGAGTTAAGTCCATGGTATATCACCCTGAGGCACGTGATCAATATATGAGGCTAGTCATGAACTTTGAGAATCTCAAGGTTTTTAGAACACTATCTGAGAATATCTTTTTCTTCTTCCCATTTTTGCATGCAGATTTGATAAATTTGGACTTGTTTCGCTGCTTAGGCGTGACATGGAATAGATTGGTGAAGGGGGAAGCAGTTAGCAGTACTTTGATCGGACCATAA 3114 0.4165 MHTWEPMISTRHHVTWIFGLCHVGQNKPCKYERKLWTLISSFLSSLSFPAGSSASNLFLLPKKETFLLKQINPQNLLPHNLLLNSFIVRVFRSLASYLLPAYSLLSCSDSMRIFVVKIKTGVSCAIIAASWLKPGNLAEIHREAKHRWFRPLEIYEILRNYQTFELTRIPPTKPPAGSLLLFDRKVVRHFRRDGYVWRKKKDVNTVSESHEKLKVSSVDVLQCYYAHKEDNKNFQRRSYWMLDEDLEHIVLVHYLEVKEGHKAAISDFHAGPVPLVGSPMSSSAQVRSPISLVQKPYVSSTNRVDCYGRALSSDYEDIDSSIGQQATLHAQPLSSPLRQSWPLFTHATTGFSQLPRIPSNSWSSSLPNSYPASLAPSWPLSQNSTRHTISKHDGNLHVEGSDKGFLADSFVHNLRDAMFDPDSAMLNDVTRGNRLINDMNFQSVIGVSKSVNQVQKEDDLNSDCTQFNDPSDHPVPESSTVIVDQQLNNENAYNGELEQFESGELKKLDSFGRWMDMEIGGDFDECLMASDFGDYWDMEVASLHMQLDVNSLGPSLSQEQLFSILDFSPDWVFSGSRTKVKEISTETKWGCMFGEIEVSAKVLTDNVICCQAPFHSPGRVPFYITCSNRLACSEIHEEGKGPNVLDDEGKGVIHLVAALGYAWAVGPLVAAGVNPNFRDARGRTGLHWASYFGREETVIALIKLGAAPGAVEDPTSTFPQGRTAADLASSRGHKGIAAYLAEADLTSHLLVVNENEIDTTAAAKAGDNAFEIAQADSSNMAMDEQYFLKEALAVLQKSARAAASIQAAFKARSFHQRQLISHGSSDIDEIALNLAAVVGSLNKVQKMSHFEDHLNHAALKIQKRYRGWKGRKEFLKICNRIVKIQAHIRGRQARKQYKRFLWSVGIVEKIILRWRRKGAGLRGFRVEQPYGIMASNVDENDEYEFLSIARKQKYDDVSKALARVKSMVYHPEARDQYMRLVMNFENLKVFRTLSENIFFFFPFLHADLINLDLFRCLGVTWNRLVKGEAVSSTLIGP 1037
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi13g0044 1037 SMART ANK_2a 681 710 IPR002110 GO:0005515
Mibi13g0044 1037 SMART ANK_2a 720 749 IPR002110 GO:0005515
Mibi13g0044 1037 Gene3D Immunoglobulins 557 634 IPR013783 -
Mibi13g0044 1037 ProSiteProfiles CG-1 DNA-binding domain profile. 137 263 IPR005559 GO:0003677
Mibi13g0044 1037 SUPERFAMILY Ankyrin repeat 621 743 IPR036770 -
Mibi13g0044 1037 SUPERFAMILY E set domains 564 633 IPR014756 -
Mibi13g0044 1037 ProSiteProfiles Ankyrin repeat region circular profile. 681 706 - -
Mibi13g0044 1037 SMART CG_1_2 140 258 IPR005559 GO:0003677
Mibi13g0044 1037 ProSiteProfiles IQ motif profile. 879 901 IPR000048 GO:0005515
Mibi13g0044 1037 Pfam CG-1 domain 143 256 IPR005559 GO:0003677
Mibi13g0044 1037 Gene3D - 635 797 IPR036770 -
Mibi13g0044 1037 ProSiteProfiles Ankyrin repeat profile. 681 713 IPR002110 GO:0005515
Mibi13g0044 1037 Gene3D - 851 901 - -
Mibi13g0044 1037 ProSiteProfiles IQ motif profile. 854 883 IPR000048 GO:0005515
Mibi13g0044 1037 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 849 904 IPR027417 -
Mibi13g0044 1037 SMART iq_5 876 898 IPR000048 GO:0005515
Mibi13g0044 1037 SMART iq_5 853 875 IPR000048 GO:0005515
Mibi13g0044 1037 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 636 984 - -
Mibi13g0044 1037 Pfam IQ calmodulin-binding motif 881 898 IPR000048 GO:0005515
Mibi13g0044 1037 Pfam IQ calmodulin-binding motif 856 874 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi13g0044 Mibi-ChrMibi13 699359 705807 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi13g0044 634 988 CAMTA Transcription Factor Family AT5G09410 46.196 3.43e-100 334
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CAMTA Mibi13g0044 CG-1 1.1e-44 No_clan