Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi13g0041 ATGTTTATTGTGGGAGTGTATGTACGTGGCCCTGACCTTCCTATTTCATCACTCTCAGAACAAACAAGCGAAGAATACACCAACCGAACCTTCTCCTCTGAATTCAAAGCATTCTTTTTGCCTTTCGCCTTTTGCCTTTATTCTCACTCTCACCCTTCCTTCATCCCTTCTTCTCTTCCCACATTAGTCCCTCGTCTCTCTTGTCTATCCACCACAACCTCAATCACAGAGTCTTCCTTAAGTATTGTTGTTTATACTGTTAGTGAAGATTGGAGAATCATGGGCTTATTTAGCTGTTGCAAAAAAGGTGATGATCATCATCAGGCTGCTGATCATGGACCCTTCGTGCCAAAGCCAAGCTATCCAACAAGGATAAGTGGTTATACTGATAGGCAATTTTCAACGGCCACTTCACAAACTTTTGATGCTCAACCCATTGCCGTCCCTTCCATTTCAGTTGATGAAATGAAGTCTCTGACTGGTAATTTTGGCACCAAATCTTTCGTTGGTGAGGGGGCTTACGGCAAGGTATATCATGGTGTATTAAAAATTGGGCTTCACGTGGCGATTAAGAAGTTAGATTCCAACAGACAACCGGAAAATGAATTTCTAGCTCAGGTCTCAATCGTATCAAGGCTAAAGCATGAAAATGTTGTTGAGCTTCTTGGTTATTGTGTTGGTGGTGGTTTTCGTGCCTTGGCCTATGAGTATGCTCCTAAAGGAACTCTTCATGATATTCTCCACGGACGCAAAGGTTTGAAGGGTGCACAACCAGGTCCAACGTTGTCATGGGAAGAAAGAGTTAAAATTGCAGTGGGGGCAGCTAGAGGACTTGAATATCTACATGAAAAAGCAGAGACTCATATCGTCCACCGTTATATCAAATCTTGCAACATACTTCTTTTTGAAGATTACGTCACAAAGATTTCTGATTTTGATTTGTCAAATGAAGCCCCTGACACCGCTGCTCGTCTCCATTCTACTCGTGTTCTTGGAACCTTCGGTTATCATGCCCCAGAATATGCCATGACCGGTCAGCTCACTTCTAAAAGTGACGTATACAGTTTTGGAGTTATCCTTTTAGAACTCATAACCGGTCGCAAACCCGTTGATCATACGCTGCCTCGAGGACAGCAGAGCCTTGTGACATGGGCAACGCCAAAACTGAGTGAAGACAAGGTGAAGCAGTGCGTTGATGTGAGACTGAAGGAAGAATACCCTCCAAAGGCAGTTGCAAAGATGGCTGCTGTTGCTGCACTGTGTGTGCAATATGAAGCAGAGCTTCGGCCAAATATGAGTATTGTGGTGAGAGCTCTTCAGCCTCTGCTTAATCCTCGTCCTTCCGTTCACGCAAAGCAACCTCCCGACTTGTGA 1374 0.4432 MFIVGVYVRGPDLPISSLSEQTSEEYTNRTFSSEFKAFFLPFAFCLYSHSHPSFIPSSLPTLVPRLSCLSTTTSITESSLSIVVYTVSEDWRIMGLFSCCKKGDDHHQAADHGPFVPKPSYPTRISGYTDRQFSTATSQTFDAQPIAVPSISVDEMKSLTGNFGTKSFVGEGAYGKVYHGVLKIGLHVAIKKLDSNRQPENEFLAQVSIVSRLKHENVVELLGYCVGGGFRALAYEYAPKGTLHDILHGRKGLKGAQPGPTLSWEERVKIAVGAARGLEYLHEKAETHIVHRYIKSCNILLFEDYVTKISDFDLSNEAPDTAARLHSTRVLGTFGYHAPEYAMTGQLTSKSDVYSFGVILLELITGRKPVDHTLPRGQQSLVTWATPKLSEDKVKQCVDVRLKEEYPPKAVAKMAAVAALCVQYEAELRPNMSIVVRALQPLLNPRPSVHAKQPPDL 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi13g0041 457 Gene3D Transferase(Phosphotransferase) domain 1 239 452 - -
Mibi13g0041 457 SUPERFAMILY Protein kinase-like (PK-like) 143 439 IPR011009 -
Mibi13g0041 457 Pfam Protein tyrosine and serine/threonine kinase 168 439 IPR001245 GO:0004672|GO:0006468
Mibi13g0041 457 Gene3D Phosphorylase Kinase; domain 1 125 237 - -
Mibi13g0041 457 ProSiteProfiles Protein kinase domain profile. 163 443 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi13g0041 457 CDD STKc_IRAK 169 442 - -
Mibi13g0041 457 ProSitePatterns Protein kinases ATP-binding region signature. 169 192 IPR017441 GO:0005524
Mibi13g0041 457 PANTHER PTO-INTERACTING PROTEIN 1-LIKE 97 448 - -
Mibi13g0041 457 FunFam pto-interacting protein 1 239 450 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi13g0041 Mibi-ChrMibi13 660085 662691 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi13g0041 118 448 Receptor kinase-like Gene Family AT3G58690 44.745 1.08e-83 261
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIII Mibi13g0041 PK_Tyr_Ser-Thr 1.1e-46 CL0016