Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi13g0040 ATGACCCTCCGTTTTACCTACCTCAACTCTGCTCGCGGTTGCGGATTAAAACCTAATCATTGCTGCCCACTGATATTTGACACCAACAAAATGGCATCGGATCTAAATTCAGGACTTTCCAAGAAAACATTTGTTTTTGGTTTGAGATTGTGGGTATTAATGGGGATAACAGTTGGTTTGTTCATTGTGATAATTCTCGTGGTGTTAATATGTCTTACTTCACGAAAGAGATCCAAGAGTGCCAATGGCAAAGTTCCCTTTAGCCATATGTTATCAATTTCGGAGGAGATCAAAGAGATTAGAGTTGATCAAGTTTCAGCTAATAACCACTTGCAGAATGGTGCTTTTATGAGTCTGAATGACAAATTTAGTGACAGAAATTCTGAGAAGGTTTTGATCCAAACTAAAAAAGGAGATGCTAGCAGTCAATCTGGTTCATTTAATCATATGGAGAAAGATGCTGCTGGTTCTCAATCTGGTGAAGAAAGCGGTGCTATGACCATTTCTGCATTCAGGTCATCTTTGCATCCTCTAACTGCGCCATCACCATTGTCTGGTCTGCCTGAATTCTCTCACCTTGGCTGGGGGTACTGGTTTACATTAAGGGACCTAGAACTTGCAACCAACAGGTTTTCAAGAGACAATGTTATTGGTGAAGGTGGATATGGAGTTGTTTATCGTGGTCAGCTAATTAATGGGAATCCAGTGGCTGTTAAGAAGCTGCTCAATAATTTAGGACAAGCTGAAAAGGAATTTAGAGTGGAGGTTGAGGCTATTGGTCATGTGCGCCATAAAAACTTAGTTCGACTTCTGGGTTATTGCATTGAAGGGACTCACAGGTTGCTGATTTATGAATACGTTAACAATGGCAATTTAGAGCAATGGCTTCATGGAGCCATGCGGCAGTATGGGTATTTAACTTGGGATGCACGAATGAAAGTTCTGCTTGGCACTGCTAAAGCGCTGGCTTACTTGCATGAAGCAATTGAACCTAAAGTGGTGCATCGGGACATTAAGTCAAGCAATATTCTAATCGATGATGACTTCAATGCCAAACTATCTGACTTTGGGCTCGCTAAGTTGCTTGGCGCGGGGAAAAGTCATATTACAACTAGAGTAATGGGTACTTTTGGATATGTGGCTCCAGAATATGCCAATTCTGGCTTGCTAAATGAGAAGAGTGATGTCTATAGCTTTGGGGTATTGATTCTTGAAGCAATTACTGGTAGGGACCCAGTGGATTATGGTCGACCAGCAGCTGAGGTAAATTTGGTGGATTGGCTCAAGATGATGGTAGGGAGTAGACGTTCAGACGAGGTAGTGGACCCCAACATTGAGACTAGGCCATCAACAAGTGCCCTTAAACGAGCCCTTCTGACTGCTTTGAGGTGTGTTGATCCTGATGGGGAGAAAAGACCTACAATGAGTCAAGTTGTCCGTATGCTTGAATCAGAGGAATATCCCATACCAAGAGAGGATCGAAGACGCCGGATAAGTCAGGCAGGAAACTTAGAGGGGCAGGGCCAAAGGGAGACTTCTGATACAGAAAAAGAGTGA 1557 0.429 MTLRFTYLNSARGCGLKPNHCCPLIFDTNKMASDLNSGLSKKTFVFGLRLWVLMGITVGLFIVIILVVLICLTSRKRSKSANGKVPFSHMLSISEEIKEIRVDQVSANNHLQNGAFMSLNDKFSDRNSEKVLIQTKKGDASSQSGSFNHMEKDAAGSQSGEESGAMTISAFRSSLHPLTAPSPLSGLPEFSHLGWGYWFTLRDLELATNRFSRDNVIGEGGYGVVYRGQLINGNPVAVKKLLNNLGQAEKEFRVEVEAIGHVRHKNLVRLLGYCIEGTHRLLIYEYVNNGNLEQWLHGAMRQYGYLTWDARMKVLLGTAKALAYLHEAIEPKVVHRDIKSSNILIDDDFNAKLSDFGLAKLLGAGKSHITTRVMGTFGYVAPEYANSGLLNEKSDVYSFGVLILEAITGRDPVDYGRPAAEVNLVDWLKMMVGSRRSDEVVDPNIETRPSTSALKRALLTALRCVDPDGEKRPTMSQVVRMLESEEYPIPREDRRRRISQAGNLEGQGQRETSDTEKE 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi13g0040 518 ProSitePatterns Serine/Threonine protein kinases active-site signature. 333 345 IPR008271 GO:0004672|GO:0006468
Mibi13g0040 518 FunFam Putative receptor-like protein kinase 193 286 - -
Mibi13g0040 518 Gene3D Transferase(Phosphotransferase) domain 1 287 497 - -
Mibi13g0040 518 MobiDBLite consensus disorder prediction 468 518 - -
Mibi13g0040 518 MobiDBLite consensus disorder prediction 485 500 - -
Mibi13g0040 518 MobiDBLite consensus disorder prediction 135 153 - -
Mibi13g0040 518 MobiDBLite consensus disorder prediction 135 163 - -
Mibi13g0040 518 PANTHER OS01G0323000 PROTEIN 34 508 - -
Mibi13g0040 518 SMART serkin_6 211 482 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi13g0040 518 Gene3D Phosphorylase Kinase; domain 1 194 286 - -
Mibi13g0040 518 ProSiteProfiles Protein kinase domain profile. 211 488 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi13g0040 518 FunFam Putative receptor-like serine/threonine-protein kinase 287 498 - -
Mibi13g0040 518 ProSitePatterns Protein kinases ATP-binding region signature. 217 240 IPR017441 GO:0005524
Mibi13g0040 518 CDD STKc_IRAK 217 483 - -
Mibi13g0040 518 Pfam Protein kinase domain 212 480 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi13g0040 518 SUPERFAMILY Protein kinase-like (PK-like) 195 489 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi13g0040 Mibi-ChrMibi13 655439 658557 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi13g0040 23 485 Trihelix Transcription Factor Family AT1G70460 38.462 3.01e-95 302
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Mibi13g0040 Pkinase 4.2e-48 CL0016