Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi13g0035 ATGGTCACCTTAAGACTTGCCAACTCCCGCACGGAGAAGAATCAACGAATGAGGCTTCCCAATTACGAAATTGGTATAACTCTTGGCACTGGCAGCTTCGCTAAGGTTAAATTGGCCAAACACATCCAATCTCATCAACTCTTTGCCCTCAAGATCATCGACAAGTCCAGGATCATCCACCTCAATATCGCCCATCAGATAAAGAGGGAGATAGCCACCCTCAGGCTTCTCAAGCATCCCAACATCGTCAGATTACACGAGGTTTTGGCCAGCAAAACGAAAATTTACATGGTCTTGGAGTACGTCAACGGAGGAGAATTGTTCGACAGAATTGCTTCCAAAGGTAGGCTTAAAGAAGCTGAAGGTAGGAAGGTTTTCAAACAGTTAATTGATGGTGTGAGCTACTGTCACAATAAAGGCGTCTTCCACAGGGATCTTAAGCTGGAAAATGTACTAGTTGATGCCCAAGGCAACATAAAGATAACCGATTTTGGCCTCAGTGCTTTGCCCCAGCACATAAGGGAAGATGGGTTGCTGCATACAACCTGTGGAAGTCCCAGCTATGTTGCTCCAGAGGTCCTTGCCAATAGGGGCTATGACGGTGCCACATCAGATACATGGTCATGTGGTGTTATCTTGTTTGTAATTCTGACGGGATATCTTCCTTTTGAAGATCGGAACATTGTAGTTCTGTATCAAAAGATTTCTAAAGGAGATGTCCACATACCAAAATGGCTATCAAGTGGAGCCCAAAACTTGCTAAGGAGGATTCTTGACCCCAATCCTCTTACCCGGATAACACTGGGCGGTATCAAAGAAGATGAATGGTTCAGGCAGGCAAATCCTGAGGACGCAGAAGGGGAAGGGGAAGAGAAAGAGAATGTGTATATCGACGATGAAGCTTTTTCAATCCATGACGAGCCACATGAAGCAGAACAGAAGAGCCCCGAGTCACCAACCCTTATCAATGCATTTCAGTTGATAGCAATGTCTTCATGCTTAGACCTCTCAGGCTTCTTTGAGAAAGAGGATGTTTCTGAGAGAAAGATGAGATTTACATCCAACCATTCAGCAAAAGATTTGATTGCAAAGATTGAAGAAATTGGAACAGAGATGGGATTTAGGGTCCAGAAGAAAAAAGGAAAATTGAAAGTGATACAAGAGAACAAGGCTCACAGAAGTCTAGGTGGCCTCTCAGTGGCAGCAGAGGTTTTTGAAATAAATCCATCCTTGCATGTAGTAGAGTTAAGTAAATCGTATGGAGACTCTTCTGTATACGGACAGCTATGCAAGAAACTATCAGATGATTTGGCAGTATCCCCGAGCCTAGCGCGTCGAAAATCAGAAGGGAGAGAAATCGGAGAGAAGAGCTAG 1374 0.4425 MVTLRLANSRTEKNQRMRLPNYEIGITLGTGSFAKVKLAKHIQSHQLFALKIIDKSRIIHLNIAHQIKREIATLRLLKHPNIVRLHEVLASKTKIYMVLEYVNGGELFDRIASKGRLKEAEGRKVFKQLIDGVSYCHNKGVFHRDLKLENVLVDAQGNIKITDFGLSALPQHIREDGLLHTTCGSPSYVAPEVLANRGYDGATSDTWSCGVILFVILTGYLPFEDRNIVVLYQKISKGDVHIPKWLSSGAQNLLRRILDPNPLTRITLGGIKEDEWFRQANPEDAEGEGEEKENVYIDDEAFSIHDEPHEAEQKSPESPTLINAFQLIAMSSCLDLSGFFEKEDVSERKMRFTSNHSAKDLIAKIEEIGTEMGFRVQKKKGKLKVIQENKAHRSLGGLSVAAEVFEINPSLHVVELSKSYGDSSVYGQLCKKLSDDLAVSPSLARRKSEGREIGEKS 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi13g0035 457 Gene3D Phosphorylase Kinase; domain 1 9 103 - -
Mibi13g0035 457 SMART serkin_6 22 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi13g0035 457 FunFam Non-specific serine/threonine protein kinase 319 440 - -
Mibi13g0035 457 FunFam Non-specific serine/threonine protein kinase 15 319 - -
Mibi13g0035 457 CDD CIPK_C 323 437 - -
Mibi13g0035 457 Gene3D Kinase associated domain 1, KA1 316 439 - -
Mibi13g0035 457 ProSitePatterns Serine/Threonine protein kinases active-site signature. 141 153 IPR008271 GO:0004672|GO:0006468
Mibi13g0035 457 SUPERFAMILY Protein kinase-like (PK-like) 19 286 IPR011009 -
Mibi13g0035 457 ProSitePatterns Protein kinases ATP-binding region signature. 28 51 IPR017441 GO:0005524
Mibi13g0035 457 ProSiteProfiles Protein kinase domain profile. 22 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi13g0035 457 Gene3D Transferase(Phosphotransferase) domain 1 104 305 - -
Mibi13g0035 457 ProSiteProfiles NAF domain profile. 317 341 IPR018451 GO:0007165
Mibi13g0035 457 FunFam Non-specific serine/threonine protein kinase 13 101 - -
Mibi13g0035 457 Pfam Protein kinase domain 22 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi13g0035 457 Pfam NAF domain 319 378 IPR004041 GO:0007165
Mibi13g0035 457 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 12 422 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi13g0035 Mibi-ChrMibi13 621426 625354 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi13g0035 85 440 CBL-interacting serine-threonine protein kinases AT3G17510 67.416 2.59e-168 476
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Mibi13g0035 Pkinase 3.9e-69 CL0016