Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi13g0031 ATGGAAGGAAAATTTGCAGCAGAAGAGTTGGTGGAAGCTGAGGAAAAGCCACCACACACATGTGATCATAGTATTACAGATGCATCCCAGAAGAATGATATTTTGGGATCCACTACTCTCAGTTTGAGTCTGAATAACCCACAAGTGAAGCCTCACAAAATTGAAGAGCAGCACTCAGCTCAATTGGGATTGATGAGAGACAAGCTTGAGCAAATGAAGAAAGAGAATCAGAATCTAAGAGCTATGCTCAGTCAAATCACTCAACATTATTCTGCTCTTCAGAATCGCCTTCTTATGTCGATGCAGCAGCAGCCGCATGAACGATCGCCTCCAAAGTGTCATAATTTGCAGAAAGACAATGAAGAAGATGAGGAGGAGGAAGCGGAGTTACCCATCCGGCAGTTCTTGGATATCCATGAGCCTTCACCTTCAGAAAGTAACAAATCAGAAGGACTGATTTTTCACAGAAACAACATCACGTGCAGCAAACCTGTATGTGAAGGAAACAGCAATAATGCGAAAATCGTTGAGTCTGATCAGGCAAATTCTTGCAGAAAAGTTAGAGTGTCCATAAGGACACGTTCGGATCTTTCTCTGATTGGTGATGGGTGTCAATGGAGAAAGTATGGACAAAAGATAGCCAAGGGAAATCCATGCCCCAGAGCTTACTATCGTTGCAACATGGGAACTGCATGTCCAGTTCGTAAGCAGGTGCAAAGGTGTGCTAAGGATAAGAGCATTGTGATTACAAGCTATGAAGGGAAGCATAATCATGCAGTCCCAGCAGCAGCGGCGCCTGTGGCGGCCGCCACGTCAGCAGCGCTGAACATGTTCCTTTCAGGCTCAACCACAAGTGGACAATTAAGCACACAATCAAATTCAGGCCTCTCGTCTTGTGCTTTTGCTTCCTTGTCTACAACTTCATCATGTCCGACCATAACACTGGACTTGACCCACACCTCCAATCAATATATGCAATTCCAAATGTCTGCCTCATCAAGCCAATCCCATCATCCATTCCCTTTTGCCTTGGATGGTTATGACAAGAGCGTGTCATTGGTAGATGTCATCAGTGCGGCTTTAGTCAAAGACCCTTCTTTTAAGGCCGCTTTAGATGCCTCCATTTCTTCACTTGCTGGATCCACTTCATTACAGCGTTAA 1161 0.4479 MEGKFAAEELVEAEEKPPHTCDHSITDASQKNDILGSTTLSLSLNNPQVKPHKIEEQHSAQLGLMRDKLEQMKKENQNLRAMLSQITQHYSALQNRLLMSMQQQPHERSPPKCHNLQKDNEEDEEEEAELPIRQFLDIHEPSPSESNKSEGLIFHRNNITCSKPVCEGNSNNAKIVESDQANSCRKVRVSIRTRSDLSLIGDGCQWRKYGQKIAKGNPCPRAYYRCNMGTACPVRKQVQRCAKDKSIVITSYEGKHNHAVPAAAAPVAAATSAALNMFLSGSTTSGQLSTQSNSGLSSCAFASLSTTSSCPTITLDLTHTSNQYMQFQMSASSSQSHHPFPFALDGYDKSVSLVDVISAALVKDPSFKAALDASISSLAGSTSLQR 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi13g0031 386 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 52 380 IPR044810 GO:0003700
Mibi13g0031 386 Gene3D WRKY domain 184 262 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mibi13g0031 386 Pfam WRKY DNA -binding domain 202 258 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mibi13g0031 386 MobiDBLite consensus disorder prediction 1 22 - -
Mibi13g0031 386 ProSiteProfiles WRKY domain profile. 195 261 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mibi13g0031 386 SUPERFAMILY WRKY DNA-binding domain 192 261 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mibi13g0031 386 MobiDBLite consensus disorder prediction 102 128 - -
Mibi13g0031 386 SMART WRKY_cls 200 260 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mibi13g0031 386 Coils Coil 55 96 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi13g0031 Mibi-ChrMibi13 596410 598589 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi13g0031 65 320 WRKY Transcription Factor Family AT4G04450 40.000 1.40e-62 205
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Mibi13g0031 WRKY 7.9e-22 CL0274